BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.3.cl.345.Contig1
(2550 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB10320.1| mutator-like transposase-like protein [Arab... 1490 0.0
ref|NP_187350.2| putative mudrA protein; protein id: At3g06... 1160 0.0
gb|AAF26998.1|AC016827_9 putative mudrA protein [Arabidopsi... 975 0.0
ref|NP_187236.1| unknown protein; protein id: At3g05850.1 [... 802 0.0
dbj|BAA82373.1| Similar to maize transposon MuDR mudrA-like... 551 e-155
>dbj|BAB10320.1| mutator-like transposase-like protein [Arabidopsis
thaliana]|gi|22531088|gb|AAM97048.1| unknown protein
[Arabidopsis thaliana]|gi|23197938|gb|AAN15496.1| unknown
protein [Arabidopsis thaliana]
Length = 757
Score = 1490 bits (3857), Expect = 0.0
Identities = 734/757 (96%), Positives = 734/757 (96%)
Frame = +2
Query: 50 MATKKVIAICQSGGEFVTNKDGSLAYSGGDAYAIDIDQDTCMSDFKSELAENFGFSWENM 229
MATKKVIAICQSGGEFVTNKDGSLAYSGGDAYAIDIDQDTCMSDFKSELAENFGFSWENM
Sbjct: 1 MATKKVIAICQSGGEFVTNKDGSLAYSGGDAYAIDIDQDTCMSDFKSELAENFGFSWENM 60
Query: 230 TLKYFLPGNKKTLITISKDKDFQRMVSFSADAPNVEIFVLPEEAEARNVSNMPXXXXXXX 409
TLKYFLPGNKKTLITISKDKDFQRMVSFSADAPNVEIFVLPEEAEARNVSNMP
Sbjct: 61 TLKYFLPGNKKTLITISKDKDFQRMVSFSADAPNVEIFVLPEEAEARNVSNMPASRSSRT 120
Query: 410 XXXEAVVPVVSAGDIVVGDDMIANDFQIEMGIMPEESSPLPCNFVLTDEKQHIKAAQQWE 589
EAVVPVVSAGDIVVGDDMIANDFQIEMGIMPEESSPLPCNFVLTDEKQHIKAAQQWE
Sbjct: 121 TASEAVVPVVSAGDIVVGDDMIANDFQIEMGIMPEESSPLPCNFVLTDEKQHIKAAQQWE 180
Query: 590 NAITGVDQRFNSFTEFRDALHKYSIAHGFTYKYKKNDSHRVSVKCKAQGCPWRITASRLS 769
NAITGVDQRFNSFTEFRDALHKYSIAHGFTYKYKKNDSHRVSVKCKAQGCPWRITASRLS
Sbjct: 181 NAITGVDQRFNSFTEFRDALHKYSIAHGFTYKYKKNDSHRVSVKCKAQGCPWRITASRLS 240
Query: 770 TTQLICIKKMNTRHTCERAVVKAGYRASRGWVGSIIKEKLKAFPDYKPKDIAEDIKREYG 949
TTQLICIKKMNTRHTCERAVVKAGYRASRGWVGSIIKEKLKAFPDYKPKDIAEDIKREYG
Sbjct: 241 TTQLICIKKMNTRHTCERAVVKAGYRASRGWVGSIIKEKLKAFPDYKPKDIAEDIKREYG 300
Query: 950 IQLNYSQAWRAKEIAREQLQGSYKKAYSQLPSFCKKIRETNPGSIAIFMTKEDSSFHRLF 1129
IQLNYSQAWRAKEIAREQLQGSYKKAYSQLPSFCKKIRETNPGSIAIFMTKEDSSFHRLF
Sbjct: 301 IQLNYSQAWRAKEIAREQLQGSYKKAYSQLPSFCKKIRETNPGSIAIFMTKEDSSFHRLF 360
Query: 1130 ISFYASISGFRQGCRPLLFLDTADLNSKYQGVMLVATAPDAEDGIFPVAFAVVDAETEDN 1309
ISFYASISGFRQGCRPLLFLDTADLNSKYQGVMLVATAPDAEDGIFPVAFAVVDAETEDN
Sbjct: 361 ISFYASISGFRQGCRPLLFLDTADLNSKYQGVMLVATAPDAEDGIFPVAFAVVDAETEDN 420
Query: 1310 WVWFLEHLKLALADPRTITFVADFQNGLKTALPLVFEKQHHHAYCLRHLAEKLNMDLQAQ 1489
WVWFLEHLKLALADPRTITFVADFQNGLKTALPLVFEKQHHHAYCLRHLAEKLNMDLQAQ
Sbjct: 421 WVWFLEHLKLALADPRTITFVADFQNGLKTALPLVFEKQHHHAYCLRHLAEKLNMDLQAQ 480
Query: 1490 FSHEARRFILNDFYAAAYATQPDAYYRSLENIKSISPDAYTWVIESEPLHWANALFEGER 1669
FSHEARRFILNDFYAAAYATQPDAYYRSLENIKSISPDAYTWVIESEPLHWANALFEGER
Sbjct: 481 FSHEARRFILNDFYAAAYATQPDAYYRSLENIKSISPDAYTWVIESEPLHWANALFEGER 540
Query: 1670 YNHMNSIFGLDFYSWVSEAHELPITQMIDELRAKLMQSIYTHQVQSREWIVSTLTPTNEE 1849
YNHMNSIFGLDFYSWVSEAHELPITQMIDELRAKLMQSIYTHQVQSREWIVSTLTPTNEE
Sbjct: 541 YNHMNSIFGLDFYSWVSEAHELPITQMIDELRAKLMQSIYTHQVQSREWIVSTLTPTNEE 600
Query: 1850 KLQKEIELARSLQVSAPHNSLFEVHGETINLVDINQCDCDCKVWRLTGLPCSHAVAVVEC 2029
KLQKEIELARSLQVSAPHNSLFEVHGETINLVDINQCDCDCKVWRLTGLPCSHAVAVVEC
Sbjct: 601 KLQKEIELARSLQVSAPHNSLFEVHGETINLVDINQCDCDCKVWRLTGLPCSHAVAVVEC 660
Query: 2030 IGKSPYEYCSRYFTSESYRLTYAESINPVPNTTMTMMILEEPPVEGVVSVXXXXXXXXXX 2209
IGKSPYEYCSRYFTSESYRLTYAESINPVPNTTMTMMILEEPPVEGVVSV
Sbjct: 661 IGKSPYEYCSRYFTSESYRLTYAESINPVPNTTMTMMILEEPPVEGVVSVTPPPTRLTPP 720
Query: 2210 XXXKSKQVEPLDMFKRQLQCSNCKGLGHNKKTCKAVS 2320
KSKQVEPLDMFKRQLQCSNCKGLGHNKKTCKAVS
Sbjct: 721 GRPKSKQVEPLDMFKRQLQCSNCKGLGHNKKTCKAVS 757
>ref|NP_187350.2| putative mudrA protein; protein id: At3g06940.1, supported by cDNA:
gi_17380907, supported by cDNA: gi_18087532, supported by
cDNA: gi_20855901 [Arabidopsis
thaliana]|gi|17380908|gb|AAL36266.1| putative mudrA
protein [Arabidopsis
thaliana]|gi|18087533|gb|AAL58900.1|AF462806_1
AT3g06940/F17A9_9 [Arabidopsis
thaliana]|gi|20855902|gb|AAM26637.1| AT3g06940/F17A9_9
[Arabidopsis thaliana]|gi|28393919|gb|AAO42367.1|
putative mudrA protein [Arabidopsis thaliana]
Length = 749
Score = 1160 bits (3002), Expect = 0.0
Identities = 583/757 (77%), Positives = 643/757 (84%), Gaps = 2/757 (0%)
Frame = +2
Query: 50 MATKKVIAICQSGGEFVTNKDGSLAYSGGDAYAIDIDQDTCMSDFKSELAENFGFSWENM 229
M T KVIAICQSGGEFVT KDGSL+YSGGDA+AIDIDQ+T M+DFKSELAENFGF E M
Sbjct: 1 MTTNKVIAICQSGGEFVTIKDGSLSYSGGDAFAIDIDQNTSMTDFKSELAENFGFGLEAM 60
Query: 230 TLKYFLPGNKKTLITISKDKDFQRMVSFSADAPNVEIFVLPEEAEARNVSNMPXXXXXXX 409
TLKYFLPGNKKTLITISKDKDF RMV+FS+DA VEIFV+PEEA A+N+S MP
Sbjct: 61 TLKYFLPGNKKTLITISKDKDFIRMVNFSSDAGTVEIFVIPEEAAAKNLSVMPASRSSRT 120
Query: 410 XXXEAVVPVVSAGDIVVGDDMIANDFQIEMGIMPEESSPLPCNFVLTDEKQHIKAAQQWE 589
E VVP + A V +DM ANDFQIEM MP++S PLPCNFVL D++ H A QQWE
Sbjct: 121 TASEGVVPAICAVGDGVEEDM-ANDFQIEMA-MPDDS-PLPCNFVLVDQRHHT-AIQQWE 176
Query: 590 NAITGVDQRFNSFTEFRDALHKYSIAHGFTYKYKKNDSHRVSVKCKAQGCPWRITASRLS 769
N ITGVDQRFN+F EFRDALHKYS+AHGF YKYKKNDSHRVSVKCKAQGCPWRITASRLS
Sbjct: 177 NVITGVDQRFNTFLEFRDALHKYSVAHGFAYKYKKNDSHRVSVKCKAQGCPWRITASRLS 236
Query: 770 TTQLICIKKMNTRHTCERAVVKAGYRASRGWVGSIIKEKLKAFPDYKPKDIAEDIKREYG 949
TTQLICIKKMN RHTCERAV+K GYRA+RGWV +I+KEKLKAFPDYKPKDIAEDIK+EYG
Sbjct: 237 TTQLICIKKMNPRHTCERAVIKPGYRATRGWVRTILKEKLKAFPDYKPKDIAEDIKKEYG 296
Query: 950 IQLNYSQAWRAKEIAREQLQGSYKKAYSQLPSFCKKIRETNPGSIAIFMTKEDSSFHRLF 1129
IQLNYSQAWRAKEIAREQLQGSYK+AYSQLP C+KI+ETNPGSIA FMTKEDSSFHRLF
Sbjct: 297 IQLNYSQAWRAKEIAREQLQGSYKEAYSQLPLICEKIKETNPGSIATFMTKEDSSFHRLF 356
Query: 1130 ISFYASISGFRQGCRPLLFLDTADLNSKYQGVMLVATAPDAEDGIFPVAFAVVDAETEDN 1309
ISFYASISGF+QG RPLLFLD A LNSKYQGVMLVATA DAEDGIFPVAFA+VD+ETE+N
Sbjct: 357 ISFYASISGFKQGSRPLLFLDNAILNSKYQGVMLVATASDAEDGIFPVAFAIVDSETEEN 416
Query: 1310 WVWFLEHLKLALADPRTITFVADFQNGLKTALPLVFEKQHHHAYCLRHLAEKLNMDLQAQ 1489
W+WFLE LK AL++ R ITFVADFQNGLK A+ VFEK HHAYCL LAEKLN+DL+ Q
Sbjct: 417 WLWFLEQLKTALSESRIITFVADFQNGLKNAIAQVFEKDAHHAYCLGQLAEKLNVDLKGQ 476
Query: 1490 FSHEARRFILNDFYAAAYATQPDAYYRSLENIKSISPDAYTWVIESEPLHWANALFEGER 1669
FSHEARR++LNDFY+ AYAT P YY +LENIKSISPDAY WVIESEP HWANALF+GER
Sbjct: 477 FSHEARRYMLNDFYSVAYATTPVGYYLALENIKSISPDAYNWVIESEPHHWANALFQGER 536
Query: 1670 YNHMNSIFGLDFYSWVSEAHELPITQMIDELRAKLMQSIYTHQVQSREWIVSTLTPTNEE 1849
YN MNS FG DFYSWVSEAHE PITQMIDE RAK+MQSIYT QV+SREW V+TLTP+NEE
Sbjct: 537 YNKMNSNFGKDFYSWVSEAHEFPITQMIDEFRAKMMQSIYTRQVKSREW-VTTLTPSNEE 595
Query: 1850 KLQKEIELARSLQVSAPHNSLFEVHG--ETINLVDINQCDCDCKVWRLTGLPCSHAVAVV 2023
KLQKEIELA+ LQVS+P SLF+V+G ++++VDINQCDCDCK WRLTGLPCSHA+AV+
Sbjct: 596 KLQKEIELAQLLQVSSPEGSLFQVNGGESSVSIVDINQCDCDCKTWRLTGLPCSHAIAVI 655
Query: 2024 ECIGKSPYEYCSRYFTSESYRLTYAESINPVPNTTMTMMILEEPPVEGVVSVXXXXXXXX 2203
CI KSPYEYCS Y T ES+RL YAESI PVPN M M+L++PP EG+V V
Sbjct: 656 GCIEKSPYEYCSTYLTVESHRLMYAESIQPVPN--MDRMMLDDPP-EGLVCV-TPPPTRR 711
Query: 2204 XXXXXKSKQVEPLDMFKRQLQCSNCKGLGHNKKTCKA 2314
K K+VEPLDM KRQLQCS CKGLGHNKKTCKA
Sbjct: 712 TPGRPKIKKVEPLDMMKRQLQCSKCKGLGHNKKTCKA 748
>gb|AAF26998.1|AC016827_9 putative mudrA protein [Arabidopsis thaliana]
Length = 609
Score = 975 bits (2521), Expect = 0.0
Identities = 483/616 (78%), Positives = 533/616 (86%), Gaps = 2/616 (0%)
Frame = +2
Query: 473 IANDFQIEMGIMPEESSPLPCNFVLTDEKQHIKAAQQWENAITGVDQRFNSFTEFRDALH 652
+ANDFQIEM MP++S PLPCNFVL D++ H A QQWEN ITGVDQRFN+F EFRDALH
Sbjct: 1 MANDFQIEMA-MPDDS-PLPCNFVLVDQRHHT-AIQQWENVITGVDQRFNTFLEFRDALH 57
Query: 653 KYSIAHGFTYKYKKNDSHRVSVKCKAQGCPWRITASRLSTTQLICIKKMNTRHTCERAVV 832
KYS+AHGF YKYKKNDSHRVSVKCKAQGCPWRITASRLSTTQLICIKKMN RHTCERAV+
Sbjct: 58 KYSVAHGFAYKYKKNDSHRVSVKCKAQGCPWRITASRLSTTQLICIKKMNPRHTCERAVI 117
Query: 833 KAGYRASRGWVGSIIKEKLKAFPDYKPKDIAEDIKREYGIQLNYSQAWRAKEIAREQLQG 1012
K GYRA+RGWV +I+KEKLKAFPDYKPKDIAEDIK+EYGIQLNYSQAWRAKEIAREQLQG
Sbjct: 118 KPGYRATRGWVRTILKEKLKAFPDYKPKDIAEDIKKEYGIQLNYSQAWRAKEIAREQLQG 177
Query: 1013 SYKKAYSQLPSFCKKIRETNPGSIAIFMTKEDSSFHRLFISFYASISGFRQGCRPLLFLD 1192
SYK+AYSQLP C+KI+ETNPGSIA FMTKEDSSFHRLFISFYASISGF+QG RPLLFLD
Sbjct: 178 SYKEAYSQLPLICEKIKETNPGSIATFMTKEDSSFHRLFISFYASISGFKQGSRPLLFLD 237
Query: 1193 TADLNSKYQGVMLVATAPDAEDGIFPVAFAVVDAETEDNWVWFLEHLKLALADPRTITFV 1372
A LNSKYQGVMLVATA DAEDGIFPVAFA+VD+ETE+NW+WFLE LK AL++ R ITFV
Sbjct: 238 NAILNSKYQGVMLVATASDAEDGIFPVAFAIVDSETEENWLWFLEQLKTALSESRIITFV 297
Query: 1373 ADFQNGLKTALPLVFEKQHHHAYCLRHLAEKLNMDLQAQFSHEARRFILNDFYAAAYATQ 1552
ADFQNGLK A+ VFEK HHAYCL LAEKLN+DL+ QFSHEARR++LNDFY+ AYAT
Sbjct: 298 ADFQNGLKNAIAQVFEKDAHHAYCLGQLAEKLNVDLKGQFSHEARRYMLNDFYSVAYATT 357
Query: 1553 PDAYYRSLENIKSISPDAYTWVIESEPLHWANALFEGERYNHMNSIFGLDFYSWVSEAHE 1732
P YY +LENIKSISPDAY WVIESEP HWANALF+GERYN MNS FG DFYSWVSEAHE
Sbjct: 358 PVGYYLALENIKSISPDAYNWVIESEPHHWANALFQGERYNKMNSNFGKDFYSWVSEAHE 417
Query: 1733 LPITQMIDELRAKLMQSIYTHQVQSREWIVSTLTPTNEEKLQKEIELARSLQVSAPHNSL 1912
PITQMIDE RAK+MQSIYT QV+SREW V+TLTP+NEEKLQKEIELA+ LQVS+P SL
Sbjct: 418 FPITQMIDEFRAKMMQSIYTRQVKSREW-VTTLTPSNEEKLQKEIELAQLLQVSSPEGSL 476
Query: 1913 FEVHG--ETINLVDINQCDCDCKVWRLTGLPCSHAVAVVECIGKSPYEYCSRYFTSESYR 2086
F+V+G ++++VDINQCDCDCK WRLTGLPCSHA+AV+ CI KSPYEYCS Y T ES+R
Sbjct: 477 FQVNGGESSVSIVDINQCDCDCKTWRLTGLPCSHAIAVIGCIEKSPYEYCSTYLTVESHR 536
Query: 2087 LTYAESINPVPNTTMTMMILEEPPVEGVVSVXXXXXXXXXXXXXKSKQVEPLDMFKRQLQ 2266
L YAESI PVPN M M+L++PP EG+V V K K+VEPLDM KRQLQ
Sbjct: 537 LMYAESIQPVPN--MDRMMLDDPP-EGLVCV-TPPPTRRTPGRPKIKKVEPLDMMKRQLQ 592
Query: 2267 CSNCKGLGHNKKTCKA 2314
CS CKGLGHNKKTCKA
Sbjct: 593 CSKCKGLGHNKKTCKA 608
>ref|NP_187236.1| unknown protein; protein id: At3g05850.1 [Arabidopsis
thaliana]|gi|6714398|gb|AAF26087.1|AC012393_13 unknown
protein [Arabidopsis thaliana]
Length = 777
Score = 802 bits (2072), Expect = 0.0
Identities = 416/782 (53%), Positives = 530/782 (67%), Gaps = 28/782 (3%)
Frame = +2
Query: 50 MATKKVIAICQSGGEFVTNKDGSLAYSGGDAYAIDIDQDTCMSDFKSELAENFGFSWENM 229
M+ K+VIAIC SGGEF T K GSL+Y GGDA+AID+D+ DF SE+ E F +
Sbjct: 1 MSGKRVIAICMSGGEFQTEKGGSLSYKGGDAHAIDVDEQMKFIDFISEIGEMFNCDVRTV 60
Query: 230 TLKYFLPGNKKTLITISKDKDFQRMVSFSADAPNVEIFVLPEEAEARNVSNMPXXXXXXX 409
+LKYFLP NKKTLI+IS DKD +RM+ F ++ ++++LPEEA ++SNMP
Sbjct: 61 SLKYFLPDNKKTLISISNDKDLKRMIKFHENSNTADVYLLPEEATP-DISNMPASRSSRT 119
Query: 410 XXXEAVVPV--------------------VSAGDIVVGDDMIANDFQIEMGIMPEE---- 517
EA+ PV VSA V ++++ ++ I P E
Sbjct: 120 TLSEAIPPVPMDDMIDDTMGPEELPISISVSAPPAVTMEEVMNRAEDAQIIINPSELMSS 179
Query: 518 --SSPLPCNFVLTDEKQHIKAAQQWENAITGVDQRFNSFTEFRDALHKYSIAHGFTYKYK 691
P P +LT + QQW+N ITGV QRF + EFR+AL KY+IA+ F ++YK
Sbjct: 180 IVEVPNPKGDILTKAR-----TQQWQNTITGVGQRFKNVGEFREALRKYAIANQFGFRYK 234
Query: 692 KNDSHRVSVKCKAQGCPWRITASRLSTTQLICIKKMNTRHTCERAVVKAGYRASRGWVGS 871
KNDSHRV+VKCKA+GCPWRI ASRLSTTQLICIKKMN HTCE A G + SR WV S
Sbjct: 235 KNDSHRVTVKCKAEGCPWRIHASRLSTTQLICIKKMNPTHTCEGAGGINGLQTSRSWVAS 294
Query: 872 IIKEKLKAFPDYKPKDIAEDIKREYGIQLNYSQAWRAKEIAREQLQGSYKKAYSQLPSFC 1051
IIKEKLK FP+YKPKDI DIK EYGIQLNY QAWR KEIAREQLQGSYK Y QLP FC
Sbjct: 295 IIKEKLKVFPNYKPKDIVSDIKEEYGIQLNYFQAWRGKEIAREQLQGSYKDGYKQLPLFC 354
Query: 1052 KKIRETNPGSIAIFMTKEDSSFHRLFISFYASISGFRQGCRPLLFLDTADLNSKYQGVML 1231
+KI ETNPGS+A F TKEDSSFHR+F+SF+AS+ GF + CRPL+FLD+ L SKYQG +L
Sbjct: 355 EKIMETNPGSLATFTTKEDSSFHRVFVSFHASVHGFLEACRPLVFLDSMQLKSKYQGTLL 414
Query: 1232 VATAPDAEDGIFPVAFAVVDAETEDNWVWFLEHLKLALADPRTITFVADFQNGLKTALPL 1411
AT+ D +D +FP+AFAVVDAET+DNW WFL L+ L+ P ITFVAD Q L+ ++P
Sbjct: 415 AATSVDGDDEVFPLAFAVVDAETDDNWEWFLLQLRSLLSTPCYITFVADRQKNLQESIPK 474
Query: 1412 VFEKQHHHAYCLRHLAEKLNMDLQAQFSHEARRFILNDFYAAAYATQPDAYYRSLENIKS 1591
VFEK HAYCLR+L ++L DL+ FSHE +R I++DFY+AAYA + D++ R +ENIK
Sbjct: 475 VFEKS-FHAYCLRYLTDELIKDLKGPFSHEIKRLIVDDFYSAAYAPRADSFERHVENIKG 533
Query: 1592 ISPDAYTWVIE-SEPLHWANALFEGERYNHMNSIFGLDFYSWVSEAHELPITQMIDELRA 1768
+SP+AY W+++ S+P HWANA F G RYNHM S G F+SW S+A++LPITQM+D +R
Sbjct: 534 LSPEAYDWIVQKSQPDHWANAYFRGARYNHMTSHSGEPFFSWASDANDLPITQMVDVIRG 593
Query: 1769 KLMQSIYTHQVQSREWIVSTLTPTNEEKLQKEIELARSLQVS-APHNSLFEVHGETINLV 1945
K+M I+ ++ + E LTP+ E KL+KE A+++ V+ + N+LF+V GET LV
Sbjct: 594 KIMGLIHVRRISANE-ANGNLTPSMEVKLEKESLRAQTVHVAPSADNNLFQVRGETYELV 652
Query: 1946 DINQCDCDCKVWRLTGLPCSHAVAVVECIGKSPYEYCSRYFTSESYRLTYAESINPVPNT 2125
++ +CDC CK W+LTGLPC HAVAV+ G++PY+YCS+YFT YR TYA+SINPVP
Sbjct: 653 NMAECDCSCKGWQLTGLPCHHAVAVINYYGRNPYDYCSKYFTVAYYRSTYAQSINPVP-- 710
Query: 2126 TMTMMILEEPPVEGVVSVXXXXXXXXXXXXXKSKQVEPLDMFKRQLQCSNCKGLGHNKKT 2305
+ + E V+V K K+ ++ KRQLQCS CKGLGHNK T
Sbjct: 711 LLEGEMCRESSGGSAVTVTPPPTRRPPGRPPK-KKTPAEEVMKRQLQCSRCKGLGHNKST 769
Query: 2306 CK 2311
CK
Sbjct: 770 CK 771
>dbj|BAA82373.1| Similar to maize transposon MuDR mudrA-like protein. (AC002340)
[Oryza sativa (japonica cultivar-group)]
Length = 1096
Score = 551 bits (1420), Expect = e-155
Identities = 298/760 (39%), Positives = 432/760 (56%), Gaps = 6/760 (0%)
Frame = +2
Query: 50 MATKKVIAICQSGGEFVTNKDGSLAYSGGDAYAIDIDQDTCMSDFKSELAENF-GFSWEN 226
M +K+++A+ Q GGEF T+ DG ++YSGG+A+A+ + D FK E++ ++
Sbjct: 1 MGSKQIVAVLQVGGEFKTDDDGQMSYSGGEAHAMHVKSDWTFKTFKHEISSTLNNLKLDS 60
Query: 227 MTLKYFLPGNKKTLITISKDKDFQRMVSFSADAPNVEIFVLPEEAEARNVSNMPXXXXXX 406
KYFLP N KTLI+IS DKD +RMV F A++ I+V+ ++A+ R
Sbjct: 61 YVFKYFLPRNNKTLISISNDKDLKRMVEFHAESETTYIYVM-KKADNR------------ 107
Query: 407 XXXXEAVVPVVSAGDIVVGDDMIANDFQIEMGIMPEESSPLPCNFVLTDEKQHIKAAQQW 586
AVVP SA V D + K W
Sbjct: 108 -VKTSAVVPAASADHAVAA--------------------------TTPDGSKRQKICASW 140
Query: 587 ENAITGVDQRFNSFTEFRDALHKYSIAHGFTYKYKKNDSHRVSVKCKAQGCPWRITASRL 766
ENAITG Q F EFRDALHKY+IAH F Y++ KNDS RV+V+C A+GCPWRI AS+
Sbjct: 141 ENAITGAGQVFEGPKEFRDALHKYAIAHRFHYRFVKNDSSRVTVECTAEGCPWRIHASKS 200
Query: 767 STTQLICIKKMNTRHTCERAVVKAGYRASRGWVGSIIKEKLKAFPDYKPKDIAEDIKREY 946
+ IKK+ HTCE VK+ AS+ WV S+IKEKL+ P+Y+P+DIA D++REY
Sbjct: 201 PAKKDFMIKKVFGSHTCESESVKSHRLASQKWVASVIKEKLRDSPNYRPRDIANDLQREY 260
Query: 947 GIQLNYSQAWRAKEIAREQLQGSYKKAYSQLPSFCKKIRETNPGSIAIFMTKEDSSFHRL 1126
G+ LNYSQAWR K IA+++L S+++A +QLP FC++I ETNPGS A EDS F R
Sbjct: 261 GLSLNYSQAWRGKSIAQKELYSSHEEACNQLPWFCQRIVETNPGSAATVEALEDSKF-RF 319
Query: 1127 FISFYASISGFRQGCRPLLFLDTADLNSKYQGVMLVATAPDAEDGIFPVAFAVVDAETED 1306
F++F+ASI GF GCRPLLFLD + +L AT+ D E +FPVA +VVD E+++
Sbjct: 320 FVAFHASIQGFVHGCRPLLFLDVISVKPNKHWKLLAATSVDGEGDMFPVALSVVDDESQE 379
Query: 1307 NWVWFLEHLKLALADPRTITFVADFQNGLKTALPLVFEKQHHHAYCLRHLAEKLNMDLQA 1486
NW WFLE LK +L +TF+++ + GL + L+F +H Y + + E+ L
Sbjct: 380 NWHWFLEQLKASLPVSGELTFISNGKCGLLDEVSLIF-PDSYHGYHVNYFIEEFKAQLDD 438
Query: 1487 QFSHEARRFILNDFYAAAYATQPDAYYRSLENIKSISPDAYTWVIESEPLHWANALFEGE 1666
+S E + ++ A Y+ + D + + +E IK S W++E++P W++A F+G
Sbjct: 439 SWSEELKDTMVEHVKKAMYSCKVDEFNQCIELIKVESDKLAEWLLETKPEKWSDAFFKGS 498
Query: 1667 RYNHMNSIFGLDFYSWVSEAHELPITQMIDELRAKLMQSIYTHQVQSREWIVSTLTPTNE 1846
R WV +EL + Q++D +R LM+ +YT + S W LTP+
Sbjct: 499 RLGQYTCNVPETILQWVPSRYELSVVQLVDTIRCNLMEMMYTRREYSNSW-TEPLTPSTN 557
Query: 1847 EKLQKEIELARSLQV-----SAPHNSLFEVHGETINLVDINQCDCDCKVWRLTGLPCSHA 2011
+K+Q+E+ A + V + +N++FEV +N+V+I+ DC C+ W ++G+PCSHA
Sbjct: 558 QKIQEEMGKALTHSVVCSTGNDGNNNVFEVCDGAVNVVNIDTWDCTCRKWHVSGIPCSHA 617
Query: 2012 VAVVECIGKSPYEYCSRYFTSESYRLTYAESINPVPNTTMTMMILEEPPVEGVVSVXXXX 2191
+AV E +P ++C++YFT+E YRLTYA SINP+P+ + + P +G
Sbjct: 618 IAVFERTDHNPLDFCAKYFTTECYRLTYAMSINPIPDIVVAAPSTD--PSQGEALHQSPI 675
Query: 2192 XXXXXXXXXKSKQVEPLDMFKRQLQCSNCKGLGHNKKTCK 2311
K K +P KR ++CS CKG GHNK TCK
Sbjct: 676 LTRRQVGRPKEKPADPRIAIKRAVRCSRCKGYGHNKATCK 715
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 132
effective length of database: 252,434,469
effective search space used: 180995514273
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)