BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.26.cl.2647.Contig2
(1751 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200847.1| elongation factor 1-alpha (EF-1-alpha); pr... 878 0.0
pir||F86214 protein T6D22.2 [imported] - Arabidopsis thalia... 878 0.0
pir||S08534 translation elongation factor eEF-1 alpha chain... 877 0.0
gb|AAK32834.1|AF361822_1 At1g07930/T6D22_3 [Arabidopsis tha... 877 0.0
gb|AAK25877.1|AF360167_1 putative translation elongation fa... 876 0.0
>ref|NP_200847.1| elongation factor 1-alpha (EF-1-alpha); protein id: At5g60390.1,
supported by cDNA: gi_13430509, supported by cDNA:
gi_16649068, supported by cDNA: gi_16930464, supported by
cDNA: gi_16974553 [Arabidopsis
thaliana]|gi|18390827|ref|NP_563799.1| elongation factor
1-alpha (EF-1-alpha); protein id: At1g07920.1, supported
by cDNA: 6135. [Arabidopsis
thaliana]|gi|18390829|ref|NP_563800.1| elongation factor
1-alpha (EF-1-alpha); protein id: At1g07930.1, supported
by cDNA: gi_13605681, supported by cDNA: gi_15081764,
supported by cDNA: gi_17064953, supported by cDNA:
gi_18086388, supported by cDNA: gi_19347768 [Arabidopsis
thaliana]|gi|18390831|ref|NP_563801.1| elongation factor
1-alpha (EF-1-alpha); protein id: At1g07940.1, supported
by cDNA: gi_14517495 [Arabidopsis
thaliana]|gi|119143|sp|P13905|EF1A_ARATH Elongation
factor 1-alpha (EF-1-alpha)|gi|81606|pir||S06724
translation elongation factor eEF-1 alpha chain -
Arabidopsis thaliana|gi|295788|emb|CAA34453.1| elongation
factor 1-alpha [Arabidopsis
thaliana]|gi|1369927|emb|CAA34454.1| elongation factor
1-alpha [Arabidopsis thaliana]|gi|1369928|emb|CAA34455.1|
elongation factor 1-alpha [Arabidopsis
thaliana]|gi|1532172|gb|AAB07882.1| EF-1alpha-A1
[Arabidopsis thaliana]|gi|1532173|gb|AAB07883.1|
EF-1alpha-A2 [Arabidopsis
thaliana]|gi|1532174|gb|AAB07884.1| EF-1alpha-A3
[Arabidopsis
thaliana]|gi|8778848|gb|AAF79847.1|AC026875_27 T6D22.3
[Arabidopsis thaliana]|gi|9757743|dbj|BAB08224.1|
elongation factor 1-alpha (EF-1-alpha) [Arabidopsis
thaliana]|gi|14517496|gb|AAK62638.1| At1g07940/T6D22_14
[Arabidopsis thaliana]|gi|16649069|gb|AAL24386.1|
elongation factor 1-alpha (EF-1-alpha) [Arabidopsis
thaliana]|gi|16930465|gb|AAL31918.1|AF419586_1
AT5g60390/muf9_40 [Arabidopsis
thaliana]|gi|16974554|gb|AAL31193.1| AT5g60390/muf9_40
[Arabidopsis thaliana]|gi|19347769|gb|AAL86336.1|
putative elongation factor 1-alpha [Arabidopsis
thaliana]|gi|21593941|gb|AAM65897.1| elongation factor
1-alpha [Arabidopsis thaliana]|gi|21689837|gb|AAM67562.1|
putative elongation factor 1-alpha [Arabidopsis
thaliana]|gi|22136248|gb|AAM91202.1| elongation factor
1-alpha [Arabidopsis thaliana]|gi|22137034|gb|AAM91362.1|
At5g60390/muf9_40 [Arabidopsis
thaliana]|gi|22655292|gb|AAM98236.1| unknown protein
[Arabidopsis thaliana]|gi|22655300|gb|AAM98240.1| unknown
protein [Arabidopsis thaliana]|gi|23308389|gb|AAN18164.1|
At1g07940/T6D22_14 [Arabidopsis
thaliana]|gi|27311635|gb|AAO00783.1| elongation factor
1-alpha [Arabidopsis thaliana]|gi|27311673|gb|AAO00802.1|
elongation factor 1-alpha [Arabidopsis
thaliana]|gi|27311809|gb|AAO00870.1| Unknown protein
[Arabidopsis thaliana]|gi|28058707|gb|AAO29944.1| Unknown
protein [Arabidopsis thaliana]
Length = 449
Score = 878 bits (2268), Expect = 0.0
Identities = 434/434 (100%), Positives = 434/434 (100%)
Frame = -2
Query: 1702 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 1523
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 1522 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 1343
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 1342 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 1163
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 1162 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 983
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 982 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 803
VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300
Query: 802 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 623
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
Query: 622 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 443
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420
Query: 442 VAVGVIKSVDKKDP 401
VAVGVIKSVDKKDP
Sbjct: 421 VAVGVIKSVDKKDP 434
>pir||F86214 protein T6D22.2 [imported] - Arabidopsis
thaliana|gi|8778823|gb|AAF79822.1|AC026875_2 T6D22.2
[Arabidopsis thaliana]
Length = 967
Score = 878 bits (2268), Expect = 0.0
Identities = 434/434 (100%), Positives = 434/434 (100%)
Frame = -2
Query: 1702 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 1523
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 519 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 578
Query: 1522 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 1343
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 579 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 638
Query: 1342 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 1163
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
Sbjct: 639 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 698
Query: 1162 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 983
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
Sbjct: 699 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 758
Query: 982 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 803
VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
Sbjct: 759 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 818
Query: 802 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 623
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 819 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 878
Query: 622 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 443
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 879 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 938
Query: 442 VAVGVIKSVDKKDP 401
VAVGVIKSVDKKDP
Sbjct: 939 VAVGVIKSVDKKDP 952
Score = 878 bits (2268), Expect = 0.0
Identities = 434/434 (100%), Positives = 434/434 (100%)
Frame = -2
Query: 1702 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 1523
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 1522 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 1343
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 1342 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 1163
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 1162 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 983
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 982 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 803
VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300
Query: 802 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 623
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
Query: 622 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 443
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420
Query: 442 VAVGVIKSVDKKDP 401
VAVGVIKSVDKKDP
Sbjct: 421 VAVGVIKSVDKKDP 434
>pir||S08534 translation elongation factor eEF-1 alpha chain (gene A4) -
Arabidopsis thaliana|gi|295789|emb|CAA34456.1| elongation
factor 1-alpha [Arabidopsis thaliana]
Length = 449
Score = 877 bits (2265), Expect = 0.0
Identities = 433/434 (99%), Positives = 434/434 (99%)
Frame = -2
Query: 1702 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 1523
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 1522 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 1343
DKLKAER+RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERDRGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 1342 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 1163
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 1162 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 983
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 982 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 803
VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300
Query: 802 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 623
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
Query: 622 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 443
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420
Query: 442 VAVGVIKSVDKKDP 401
VAVGVIKSVDKKDP
Sbjct: 421 VAVGVIKSVDKKDP 434
>gb|AAK32834.1|AF361822_1 At1g07930/T6D22_3 [Arabidopsis thaliana]|gi|16323344|gb|AAL15385.1|
At1g07930/T6D22_3 [Arabidopsis thaliana]
Length = 449
Score = 877 bits (2265), Expect = 0.0
Identities = 433/434 (99%), Positives = 434/434 (99%)
Frame = -2
Query: 1702 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 1523
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKR+IERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRLIERFEKEAAEMNKRSFKYAWVL 60
Query: 1522 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 1343
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 1342 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 1163
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 1162 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 983
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 982 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 803
VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300
Query: 802 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 623
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
Query: 622 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 443
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420
Query: 442 VAVGVIKSVDKKDP 401
VAVGVIKSVDKKDP
Sbjct: 421 VAVGVIKSVDKKDP 434
>gb|AAK25877.1|AF360167_1 putative translation elongation factor eEF-1 alpha chain A4
[Arabidopsis thaliana]
Length = 449
Score = 876 bits (2264), Expect = 0.0
Identities = 433/434 (99%), Positives = 433/434 (99%)
Frame = -2
Query: 1702 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 1523
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 1522 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 1343
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 1342 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 1163
GGFEAGISKDGQTREHA LAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHAFLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 1162 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 983
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 982 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 803
VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300
Query: 802 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 623
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
Query: 622 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 443
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420
Query: 442 VAVGVIKSVDKKDP 401
VAVGVIKSVDKKDP
Sbjct: 421 VAVGVIKSVDKKDP 434
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 129
effective length of database: 256,451,607
effective search space used: 116429029578
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)