BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.2.cl.233.Contig1
(2208 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195774.1| receptor like protein kinase; protein id: ... 1050 0.0
ref|NP_195775.1| receptor like protein kinase; protein id: ... 808 0.0
ref|NP_195776.1| receptor like protein kinase; protein id: ... 806 0.0
ref|NP_187499.1| putative serine/threonine protein kinase; ... 757 0.0
gb|AAM88628.1| putative receptor-like protein kinase [Oryza... 460 e-133
>ref|NP_195774.1| receptor like protein kinase; protein id: At5g01540.1, supported by
cDNA: gi_13605542 [Arabidopsis
thaliana]|gi|11346436|pir||T48175 receptor like protein
kinase - Arabidopsis thaliana|gi|7327813|emb|CAB82270.1|
receptor like protein kinase [Arabidopsis
thaliana]|gi|13605543|gb|AAK32765.1|AF361597_1
AT5g01540/F7A7_60 [Arabidopsis
thaliana]|gi|23308177|gb|AAN18058.1| At5g01540/F7A7_60
[Arabidopsis thaliana]
Length = 682
Score = 1050 bits (2714), Expect(2) = 0.0
Identities = 526/558 (94%), Positives = 526/558 (94%)
Frame = -3
Query: 1747 NKGFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIG 1568
NKGFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIG
Sbjct: 108 NKGFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIG 167
Query: 1567 NDIGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYPA 1388
NDIGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYPA
Sbjct: 168 NDIGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYPA 227
Query: 1387 RLGFKPTKPLISQHVPKLLEIVQEEMYVGFTASTGKGQSSAHYVMGWSFSSGGERPIADV 1208
RLGFKPTKPLISQHVPKLLEIVQEEMYVGFTASTGKGQSSAHYVMGWSFSSGGERPIADV
Sbjct: 228 RLGFKPTKPLISQHVPKLLEIVQEEMYVGFTASTGKGQSSAHYVMGWSFSSGGERPIADV 287
Query: 1207 LILSELPPPPPNKAKKEGLNSQVIVMIVALSAXXXXXXXXXXXXXMYKKRLGQEETLEDW 1028
LILSELPPPPPNKAKKEGLNSQVIVMIVALSA MYKKRLGQEETLEDW
Sbjct: 288 LILSELPPPPPNKAKKEGLNSQVIVMIVALSAVMLVMLVLLFFFVMYKKRLGQEETLEDW 347
Query: 1027 EIDHPRRLRYRDLYVATDXXXXXXXXXXXXXXXXXXXKLPNSDPIAVKKIIPSSRQGVRE 848
EIDHPRRLRYRDLYVATD KLPNSDPIAVKKIIPSSRQGVRE
Sbjct: 348 EIDHPRRLRYRDLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGVRE 407
Query: 847 FVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNA 668
FVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNA
Sbjct: 408 FVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNA 467
Query: 667 RFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSET 488
RFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSET
Sbjct: 468 RFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSET 527
Query: 487 TALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGTFFLVDWVMELHAN 308
TALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGTFFLVDWVMELHAN
Sbjct: 528 TALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGTFFLVDWVMELHAN 587
Query: 307 GEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDE 128
GEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDE
Sbjct: 588 GEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDE 647
Query: 127 WGYSKSSRSEFGSKLVGY 74
WGYSKSSRSEFGSKLVGY
Sbjct: 648 WGYSKSSRSEFGSKLVGY 665
Score = 166 bits (419), Expect(2) = 0.0
Identities = 86/97 (88%), Positives = 87/97 (89%)
Frame = -2
Query: 2069 MGTQRSMFIVSXXXXXXXXLSVHVRAQRTTTNFAFRGFNGNQSKIRIEGAAMIKPDGLLR 1890
MGTQRSMFIVS LSVHVRAQRTTTNFAFRGFNGNQSKIRIEGAAMIKPDGLLR
Sbjct: 1 MGTQRSMFIVSFLFKLFLFLSVHVRAQRTTTNFAFRGFNGNQSKIRIEGAAMIKPDGLLR 60
Query: 1889 LTDRKSNVTGTAFYHKPVRLVNRNSTNVTIRSFSHVF 1779
LTDRKSNVTGTAFYHKPVRL+NRNSTNVTIRSFS F
Sbjct: 61 LTDRKSNVTGTAFYHKPVRLLNRNSTNVTIRSFSTSF 97
>ref|NP_195775.1| receptor like protein kinase; protein id: At5g01550.1 [Arabidopsis
thaliana]|gi|11346437|pir||T48176 receptor like protein
kinase - Arabidopsis thaliana|gi|7327814|emb|CAB82271.1|
receptor like protein kinase [Arabidopsis thaliana]
Length = 688
Score = 808 bits (2088), Expect(2) = 0.0
Identities = 405/560 (72%), Positives = 453/560 (80%), Gaps = 2/560 (0%)
Frame = -3
Query: 1747 NKGFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIG 1568
N GFGFTFTLSPTP R A SAQYLG+ NK N+G+ NHVFAVEFDTVQG +D DR G
Sbjct: 103 NGGFGFTFTLSPTPDRTGAESAQYLGLLNKANDGNSTNHVFAVEFDTVQGFKD-GADRTG 161
Query: 1567 NDIGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYPA 1388
N IGLN+NS TSD+QEPVVYY+N+D N+KEDF L+SG+PI+A+L+YDG TQ LN+TVYPA
Sbjct: 162 NHIGLNFNSLTSDVQEPVVYYDNEDPNRKEDFPLQSGDPIRAILDYDGPTQTLNLTVYPA 221
Query: 1387 RLGFKPTKPLISQHVPKLLEIVQEEMYVGFTASTGKGQSSAHYVMGWSFSSGGERPIADV 1208
L +P +PLIS+ VPKL +IVQEEMYVGFTA+TG+ QSSAHYVMGWSFSSGG+ D
Sbjct: 222 NLKSRPVRPLISRPVPKLSQIVQEEMYVGFTAATGRDQSSAHYVMGWSFSSGGDLLTEDT 281
Query: 1207 LILSELPPPPPNKAKKEGLNSQVIVMIVALSAXXXXXXXXXXXXXMYKKRLGQEETLEDW 1028
L L ELP PPPN AKK G NSQV+ +IVALS MYKKRL Q E LEDW
Sbjct: 282 LDLLELPRPPPNTAKKRGYNSQVLALIVALSGVTVILLALLFFFVMYKKRLQQGEVLEDW 341
Query: 1027 EIDHPRRLRYRDLYVATDXXXXXXXXXXXXXXXXXXXKL--PNSDPIAVKKIIPSSRQGV 854
EI+HP RLRY+DLY ATD L P+SD IAVKKI P+S QGV
Sbjct: 342 EINHPHRLRYKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGV 401
Query: 853 REFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSW 674
REF+AEIESLG+LRHKNLVNLQGWCK KNDLLLIYDYIPNGSLDSLLY+ PR+SG VLSW
Sbjct: 402 REFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSW 461
Query: 673 NARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLS 494
NARF+IAKGIASGLLYLHEEWEK+VIHRD+KPSNVLI+ MNPRLGDFGLARLYERG+ S
Sbjct: 462 NARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQS 521
Query: 493 ETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGTFFLVDWVMELH 314
TT +VGTIGYMAPEL+RNG SSASDVFAFGVLLLEIV GR+PTDSGTFFL DWVMELH
Sbjct: 522 NTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTFFLADWVMELH 581
Query: 313 ANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEID 134
A GEIL A+DPRLG GYDG EARLAL VGLLCCHQ+P SRPSMR VLRYLNG+++VPEID
Sbjct: 582 ARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVPEID 641
Query: 133 DEWGYSKSSRSEFGSKLVGY 74
++WGYS SSRS+ GS GY
Sbjct: 642 NDWGYSDSSRSDLGSNFEGY 661
Score = 99.8 bits (247), Expect(2) = 0.0
Identities = 56/84 (66%), Positives = 62/84 (73%), Gaps = 7/84 (8%)
Frame = -2
Query: 2009 SVHVRAQRTTTN-----FAFRGFNGNQSKIRIEGAAMIKPDGLLRLTDRKSNVTGTAFYH 1845
++ RAQRTTT F FRGF+GNQS I GAA IK DGLLRLTDR SNVTGT+FYH
Sbjct: 9 TIPTRAQRTTTETPKTEFIFRGFSGNQSNIVTTGAATIKLDGLLRLTDRNSNVTGTSFYH 68
Query: 1844 KPVRLV--NRNSTNVTIRSFSHVF 1779
KPVRL+ N +STN TIRSFS F
Sbjct: 69 KPVRLLETNTSSTNSTIRSFSTSF 92
>ref|NP_195776.1| receptor like protein kinase; protein id: At5g01560.1 [Arabidopsis
thaliana]|gi|11346438|pir||T48177 receptor like protein
kinase - Arabidopsis thaliana|gi|7327815|emb|CAB82272.1|
receptor like protein kinase [Arabidopsis thaliana]
Length = 685
Score = 806 bits (2083), Expect(2) = 0.0
Identities = 408/560 (72%), Positives = 460/560 (81%), Gaps = 2/560 (0%)
Frame = -3
Query: 1747 NKGFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIG 1568
N GFGFTFTLSPTP R +A QY+G+ N+ N+G+ NHVFAVEFDTVQG +D T+RIG
Sbjct: 99 NGGFGFTFTLSPTPNRTDADPEQYMGLLNERNDGNSSNHVFAVEFDTVQGFKD-GTNRIG 157
Query: 1567 NDIGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYPA 1388
N IGLN+NS +SD+QEPV Y+NN+D ++KE+FQL SG PIQ L+Y G T+ LN+TVYP
Sbjct: 158 NHIGLNFNSLSSDVQEPVAYFNNND-SQKEEFQLVSGEPIQVFLDYHGPTKTLNLTVYPT 216
Query: 1387 RLGFKPTKPLISQHVPKLLEIVQEEMYVGFTASTGK-GQSSAHYVMGWSFSSGGERPIAD 1211
RLG+KP PLIS+ VPKL +IV +EM+VGFTA+TG+ GQSSAHYVMGWSF+SGGE P+A
Sbjct: 217 RLGYKPRIPLISREVPKLSDIVVDEMFVGFTAATGRHGQSSAHYVMGWSFASGGEHPLAA 276
Query: 1210 VLILSELPPPPPNKAKKEGLNSQVIVMIVALSAXXXXXXXXXXXXXMYKKRLGQEETLED 1031
+L +S+LPPPPPNKAKK G N +VI +IVALS MYKKR+ QEE LED
Sbjct: 277 MLDISQLPPPPPNKAKKRGYNGKVIALIVALSTVISIMLVLLFLFMMYKKRMQQEEILED 336
Query: 1030 WEIDHPRRLRYRDLYVATDXXXXXXXXXXXXXXXXXXXKL-PNSDPIAVKKIIPSSRQGV 854
WEIDHP R RYRDLY AT+ + +SD IAVKKI P+S QGV
Sbjct: 337 WEIDHPHRFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGV 396
Query: 853 REFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSW 674
REFVAEIESLG+LRHKNLVNLQGWCKH+NDLLLIYDYIPNGSLDSLLY+ PRRSGAVLSW
Sbjct: 397 REFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSW 456
Query: 673 NARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLS 494
NARFQIAKGIASGLLYLHEEWE+IVIHRDVKPSNVLIDS MNPRLGDFGLARLYERG+ S
Sbjct: 457 NARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQS 516
Query: 493 ETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGTFFLVDWVMELH 314
TT +VGTIGYMAPEL+RNGN SSASDVFAFGVLLLEIV GRKPTDSGTFF+ DWVMEL
Sbjct: 517 CTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTDSGTFFIADWVMELQ 576
Query: 313 ANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEID 134
A+GEILSAIDPRLGSGYD GEARLALAVGLLCCH KP SRP MR+VLRYLN +E+VPEI
Sbjct: 577 ASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPEIH 636
Query: 133 DEWGYSKSSRSEFGSKLVGY 74
D WGYS SSR++ GSKLVGY
Sbjct: 637 DNWGYSDSSRTDLGSKLVGY 656
Score = 98.6 bits (244), Expect(2) = 0.0
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = -2
Query: 2003 HVRAQRTTTNFAFRGFNGNQSKIRIEGAAMIKPDGLLRLTDRKSNVTGTAFYHKPVRLVN 1824
HV TTT F F GF GNQS+I ++G + I +GLLRLTDR S+V GTAFYHKPVRL++
Sbjct: 14 HVATTETTTEFIFHGFKGNQSEIHMQGDSTITSNGLLRLTDRNSDVVGTAFYHKPVRLLD 73
Query: 1823 RNSTNVTIRSFSHVF 1779
NSTN T+RSFS F
Sbjct: 74 SNSTNTTVRSFSTSF 88
>ref|NP_187499.1| putative serine/threonine protein kinase; protein id: At3g08870.1
[Arabidopsis
thaliana]|gi|6403505|gb|AAF07845.1|AC010871_21 putative
serine/threonine protein kinase [Arabidopsis thaliana]
Length = 693
Score = 757 bits (1955), Expect(2) = 0.0
Identities = 376/558 (67%), Positives = 442/558 (78%)
Frame = -3
Query: 1747 NKGFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIG 1568
N GFGFTFTLSPTP R A SAQYLG+ N+ NNG+P NHVFAVEFDTVQG +D DR G
Sbjct: 113 NGGFGFTFTLSPTPNRPGAESAQYLGLLNRTNNGNPSNHVFAVEFDTVQGFKD-GADRRG 171
Query: 1567 NDIGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYPA 1388
N IGLN+N+ +S++QEP++YY+ +D +KEDFQLESG PI+ L++YDG+++ LNVT+YP
Sbjct: 172 NHIGLNFNNLSSNVQEPLIYYDTED--RKEDFQLESGEPIRVLIDYDGSSETLNVTIYPT 229
Query: 1387 RLGFKPTKPLISQHVPKLLEIVQEEMYVGFTASTGKGQSSAHYVMGWSFSSGGERPIADV 1208
RL FKP KPLIS+ V +L EIV++EMYVGFTA+TGK QSSAHYVMGWSFSS GE P+AD
Sbjct: 230 RLEFKPKKPLISRRVSELSEIVKDEMYVGFTAATGKDQSSAHYVMGWSFSSCGENPMADW 289
Query: 1207 LILSELPPPPPNKAKKEGLNSQVIVMIVALSAXXXXXXXXXXXXXMYKKRLGQEETLEDW 1028
L +S LPPPP + K+G NSQVIV+IVALS MYK+R+ +E+TLEDW
Sbjct: 290 LEISRLPPPP-RLSNKKGYNSQVIVLIVALSIVTLVLLVLLFIFVMYKRRIQEEDTLEDW 348
Query: 1027 EIDHPRRLRYRDLYVATDXXXXXXXXXXXXXXXXXXXKLPNSDPIAVKKIIPSSRQGVRE 848
EID+P R RYRDLY+AT L +S PIAVKKI +S QGVRE
Sbjct: 349 EIDYPHRFRYRDLYLATKKFKESEIIGTGGFGIVYRGNLSSSGPIAVKKITSNSLQGVRE 408
Query: 847 FVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNA 668
F+AEIESLG+L HKNLVNLQGWCKHKN+LLLIYDYIPNGSLDSLLY PRR+G VL W+
Sbjct: 409 FMAEIESLGRLGHKNLVNLQGWCKHKNELLLIYDYIPNGSLDSLLYQTPRRNGIVLPWDV 468
Query: 667 RFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSET 488
RF+I KGIASGLLYLHEEWE+IV+HRDVKPSNVLID MN +LGDFGLARLYERGTL++T
Sbjct: 469 RFEIIKGIASGLLYLHEEWEQIVVHRDVKPSNVLIDEDMNAKLGDFGLARLYERGTLTQT 528
Query: 487 TALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGTFFLVDWVMELHAN 308
T +VGT+GYMAPEL+RNG S+ASDVFAFGVLLLEIVCG KPT++ FFL DWVME H N
Sbjct: 529 TKIVGTLGYMAPELTRNGKGSTASDVFAFGVLLLEIVCGNKPTNAENFFLADWVMEFHTN 588
Query: 307 GEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDE 128
G IL +D LGS ++G EA+LAL VGLLCCHQKP RPSMR+VLRYLNGEENVP+ID+
Sbjct: 589 GGILCVVDQNLGSSFNGREAKLALVVGLLCCHQKPKFRPSMRMVLRYLNGEENVPQIDEN 648
Query: 127 WGYSKSSRSEFGSKLVGY 74
WG+S SSR + S +VGY
Sbjct: 649 WGFSDSSRDDHKSNVVGY 666
Score = 72.8 bits (177), Expect(2) = 0.0
Identities = 41/76 (53%), Positives = 52/76 (67%), Gaps = 2/76 (2%)
Frame = -2
Query: 2000 VRAQRTTTNFAFRGFNGNQSKIRIEGAAMIKPDG-LLRLTDRKSNVTGTAFYHKPVRLVN 1824
V A+ TT F F GF NQ+ I+ EGA+ I+ D LLRLT+RK NVTGTAFY KP+RL
Sbjct: 27 VLAEATTAKFTFIGFKENQTDIQTEGASTIQHDNDLLRLTNRKQNVTGTAFYRKPIRLRE 86
Query: 1823 -RNSTNVTIRSFSHVF 1779
NS+++ + SFS F
Sbjct: 87 LTNSSDIKVCSFSTSF 102
>gb|AAM88628.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 674
Score = 460 bits (1184), Expect(2) = e-133
Identities = 259/545 (47%), Positives = 347/545 (63%), Gaps = 11/545 (2%)
Frame = -3
Query: 1741 GFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIGND 1562
G G F ++ + A + QYLG+ K N GDP NHVFAVEFDTVQ + N GN
Sbjct: 103 GHGLAFVVAASKVLPGATAEQYLGLLGKSNMGDPSNHVFAVEFDTVQANGLLNETN-GNH 161
Query: 1561 IGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYP--A 1388
+G++ NS S++ EP Y+ D K + LES PIQA ++YDG+ ++LNVT+ P +
Sbjct: 162 VGVDLNSLVSNVSEPAAYFT-DGGGGKRNLTLESAQPIQAWVDYDGSAKILNVTIAPVAS 220
Query: 1387 RLGFKPTKPLISQHVPKLLEIVQEEMYVGFTASTGKGQSSAHYVMGWSFSSGG--ERPIA 1214
+ +P +PLIS H LL I ++EMYVGF++STGK +S+HYV+ WSF +GG RPI
Sbjct: 221 TVPTRPRRPLIS-HAVDLLPIFKQEMYVGFSSSTGK-LASSHYVLAWSFRTGGGAARPID 278
Query: 1213 DVLILSELPPPPPNKAKKEGLNSQVIVMIVALS--AXXXXXXXXXXXXXMYKKRLGQEET 1040
LS LP P A ++ V+V IVAL+ A ++R +T
Sbjct: 279 ----LSRLPSVPKKPAPPP--SASVVVKIVALTCAATVTVIVAAIGVALWLRRRAALADT 332
Query: 1039 LEDWEIDHPRRLRYRDLYVATDXXXXXXXXXXXXXXXXXXXKLPNS-DPIAVKKIIPSSR 863
LE+WE+DHP RL YR+LY+AT L S D +AVK+I + R
Sbjct: 333 LEEWELDHPHRLPYRELYMATKGFKNSELLGAGGFGEVYRGVLRRSGDVVAVKRISSNGR 392
Query: 862 QGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLY--TVPRRSG 689
QG+REFVAE+ SLG++RH+NLV L+GWCK +DLLL+Y+++PNGSLD+LL+ +
Sbjct: 393 QGMREFVAEVASLGRMRHRNLVELRGWCKRGHDLLLVYEFMPNGSLDALLFGGAPATATA 452
Query: 688 AVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMN-PRLGDFGLARLY 512
L+W R +I +G+ASGL+YLHEEWE++V+HRDVK SNVL+ + + RLGDFGLARLY
Sbjct: 453 TALTWEQRVRILRGVASGLVYLHEEWEQVVVHRDVKASNVLLGADASAARLGDFGLARLY 512
Query: 511 ERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGT-FFLV 335
E G TT +VGT+GYMAPEL+ G ++A+DVFA+G LLLE CGR+P D T L+
Sbjct: 513 EHGGDPATTRVVGTLGYMAPELTVTGKATTATDVFAYGALLLEAACGRRPIDPATGVNLL 572
Query: 334 DWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGE 155
WV E A GE++ A+D RL YD EARL L +GL C +P +RPSMR V +YL+GE
Sbjct: 573 RWVREHGARGELVHAVDERLDGRYDKEEARLVLWLGLACSQARPEARPSMRQVCQYLDGE 632
Query: 154 ENVPE 140
E+VPE
Sbjct: 633 EDVPE 637
Score = 40.8 bits (94), Expect(2) = e-133
Identities = 21/66 (31%), Positives = 39/66 (58%)
Frame = -2
Query: 1976 NFAFRGFNGNQSKIRIEGAAMIKPDGLLRLTDRKSNVTGTAFYHKPVRLVNRNSTNVTIR 1797
+F + GF N + + ++G+A + G L+LT+ +N+ G AF+ PV++V ++ +
Sbjct: 31 DFIYNGFR-NAANLSLDGSATVLRGGALQLTNDSNNIMGHAFFDSPVQMV----SDAAVV 85
Query: 1796 SFSHVF 1779
SFS F
Sbjct: 86 SFSTAF 91
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 131
effective length of database: 253,773,515
effective search space used: 153279203060
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)