BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.16.cl.1601.Contig1
(1775 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564120.1| catalase 3; protein id: At1g20620.1, suppo... 1033 0.0
gb|AAM65021.1| unknown [Arabidopsis thaliana] 1031 0.0
gb|AAC49807.1| catalase 3 [Arabidopsis thaliana]|gi|2511726... 1021 0.0
gb|AAF79625.1|AC027665_26 F5M15.5 [Arabidopsis thaliana]|gi... 1021 0.0
gb|AAB53101.2| catalase [Brassica napus] 1020 0.0
>ref|NP_564120.1| catalase 3; protein id: At1g20620.1, supported by cDNA: 35868.,
supported by cDNA: gi_15912338, supported by cDNA:
gi_16604411 [Arabidopsis
thaliana]|gi|21903384|sp|Q42547|CAT3_ARATH Catalase
3|gi|15912339|gb|AAL08303.1| At1g20620/F5M15_4
[Arabidopsis thaliana]|gi|16604412|gb|AAL24212.1|
At1g20620/F5M15_4 [Arabidopsis thaliana]
Length = 492
Score = 1033 bits (2671), Expect = 0.0
Identities = 490/492 (99%), Positives = 492/492 (99%)
Frame = +3
Query: 42 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLENYHLIEKVANFTRERIP 221
MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLE+YHLIEKVANFTRERIP
Sbjct: 1 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIP 60
Query: 222 ERVVHARGISAKGFFEVTHNISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR 401
ERVVHARGISAKGFFEVTH+ISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR
Sbjct: 61 ERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR 120
Query: 402 GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP 581
GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP
Sbjct: 121 GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP 180
Query: 582 ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA 761
ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA
Sbjct: 181 ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA 240
Query: 762 KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL 941
KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL
Sbjct: 241 KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL 300
Query: 942 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY 1121
QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY
Sbjct: 301 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY 360
Query: 1122 LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC 1301
LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC
Sbjct: 361 LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC 420
Query: 1302 VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ 1481
VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ
Sbjct: 421 VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ 480
Query: 1482 KLASRLNVRPSI 1517
KLASRLNVRPSI
Sbjct: 481 KLASRLNVRPSI 492
>gb|AAM65021.1| unknown [Arabidopsis thaliana]
Length = 492
Score = 1031 bits (2667), Expect = 0.0
Identities = 489/492 (99%), Positives = 491/492 (99%)
Frame = +3
Query: 42 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLENYHLIEKVANFTRERIP 221
MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLE+YHLIEKVANFTRERIP
Sbjct: 1 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIP 60
Query: 222 ERVVHARGISAKGFFEVTHNISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR 401
ERVVHARGISAKGFFEVTH+ISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR
Sbjct: 61 ERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR 120
Query: 402 GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP 581
GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP
Sbjct: 121 GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP 180
Query: 582 ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA 761
ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA
Sbjct: 181 ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA 240
Query: 762 KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL 941
KVVGGANHSHATKDLHDAI SGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL
Sbjct: 241 KVVGGANHSHATKDLHDAIVSGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL 300
Query: 942 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY 1121
QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY
Sbjct: 301 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY 360
Query: 1122 LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC 1301
LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC
Sbjct: 361 LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC 420
Query: 1302 VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ 1481
VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ
Sbjct: 421 VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ 480
Query: 1482 KLASRLNVRPSI 1517
KLASRLNVRPSI
Sbjct: 481 KLASRLNVRPSI 492
>gb|AAC49807.1| catalase 3 [Arabidopsis thaliana]|gi|2511726|gb|AAC17732.1| catalase
3 [Arabidopsis thaliana]
Length = 492
Score = 1021 bits (2640), Expect = 0.0
Identities = 485/492 (98%), Positives = 488/492 (98%)
Frame = +3
Query: 42 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLENYHLIEKVANFTRERIP 221
MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLE+YHLIEKVANFTRERIP
Sbjct: 1 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIP 60
Query: 222 ERVVHARGISAKGFFEVTHNISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR 401
ERVVHARGISAKGFFEVTH+ISNLTCADFLRAPGVQTPVIVRFSTVVH RASPETMRDIR
Sbjct: 61 ERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHGRASPETMRDIR 120
Query: 402 GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP 581
GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPN KTNIQEYWRILDYMSHLP
Sbjct: 121 GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNRKTNIQEYWRILDYMSHLP 180
Query: 582 ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA 761
ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA
Sbjct: 181 ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA 240
Query: 762 KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL 941
KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL
Sbjct: 241 KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL 300
Query: 942 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY 1121
QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY
Sbjct: 301 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY 360
Query: 1122 LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC 1301
LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC
Sbjct: 361 LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC 420
Query: 1302 VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ 1481
VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIW SYW +ADRSLGQ
Sbjct: 421 VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWTSYWLKADRSLGQ 480
Query: 1482 KLASRLNVRPSI 1517
KLASRLNVRPSI
Sbjct: 481 KLASRLNVRPSI 492
>gb|AAF79625.1|AC027665_26 F5M15.5 [Arabidopsis thaliana]|gi|8886925|gb|AAF80611.1|AC069251_4
F2D10.11 [Arabidopsis thaliana]
Length = 1013
Score = 1021 bits (2639), Expect = 0.0
Identities = 484/487 (99%), Positives = 487/487 (99%)
Frame = +3
Query: 54 KYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLENYHLIEKVANFTRERIPERVV 233
+YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLE+YHLIEKVANFTRERIPERVV
Sbjct: 44 RYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVV 103
Query: 234 HARGISAKGFFEVTHNISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAV 413
HARGISAKGFFEVTH+ISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAV
Sbjct: 104 HARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAV 163
Query: 414 KFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLL 593
KFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLL
Sbjct: 164 KFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLL 223
Query: 594 TWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVG 773
TWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVG
Sbjct: 224 TWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVG 283
Query: 774 GANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVG 953
GANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVG
Sbjct: 284 GANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVG 343
Query: 954 RLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLP 1133
RLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLP
Sbjct: 344 RLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLP 403
Query: 1134 VNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKK 1313
VNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKK
Sbjct: 404 VNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKK 463
Query: 1314 ENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLAS 1493
ENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLAS
Sbjct: 464 ENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLAS 523
Query: 1494 RLNVRPS 1514
RLNVRPS
Sbjct: 524 RLNVRPS 530
Score = 815 bits (2106), Expect = 0.0
Identities = 383/485 (78%), Positives = 433/485 (88%)
Frame = +3
Query: 60 RPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLENYHLIEKVANFTRERIPERVVHA 239
RPSSA+++PF+TTN GAPV NN SSLT+G RGP+LLE+YHL+EK+ANF RERIPERVVHA
Sbjct: 528 RPSSAHDSPFFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIPERVVHA 587
Query: 240 RGISAKGFFEVTHNISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKF 419
RG SAKGFFEVTH+I+ LT ADFLR PGVQTPVIVRFSTV+HER SPET+RD RGFAVKF
Sbjct: 588 RGASAKGFFEVTHDITQLTSADFLRGPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKF 647
Query: 420 YTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLTW 599
YTREGNFDLVGNN PVFF+RDG++FPD+VHALKPNPK++IQE WRILD+ SH PESL +
Sbjct: 648 YTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMF 707
Query: 600 CWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVGGA 779
++FDD+GIPQDYRHMEG GV+TY LI K+GK +VKFHWKPTCGIK L+DEEA VGGA
Sbjct: 708 SFLFDDLGIPQDYRHMEGAGVNTYMLINKAGKAHYVKFHWKPTCGIKCLSDEEAIRVGGA 767
Query: 780 NHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVGRL 959
NHSHATKDL+D+IA+GNYP+W LF+Q MDPA EDKFDFDPLDVTKIWPEDILPLQPVGRL
Sbjct: 768 NHSHATKDLYDSIAAGNYPQWNLFVQVMDPAHEDKFDFDPLDVTKIWPEDILPLQPVGRL 827
Query: 960 VLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLPVN 1139
VLN+ IDNFFNE EQ+AF P LVVPGI+YSDDKLLQ RIF+Y D+QRHRLGPNYLQLPVN
Sbjct: 828 VLNKNIDNFFNENEQIAFCPALVVPGIHYSDDKLLQTRIFSYADSQRHRLGPNYLQLPVN 887
Query: 1140 APKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKKEN 1319
APKCAHHNNHH+GFMNFMHRDEE+NY+PS+ DPVR AEK PT +G R KC I KEN
Sbjct: 888 APKCAHHNNHHDGFMNFMHRDEEVNYFPSRLDPVRHAEKYPTTPIVCSGNREKCFIGKEN 947
Query: 1320 NFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLASRL 1499
NFKQ G+RYRSW DRQ+RFVKR+VE LSEPR+THEIR IWISYWSQAD+SLGQKLA+RL
Sbjct: 948 NFKQPGERYRSWDSDRQERFVKRFVEALSEPRVTHEIRSIWISYWSQADKSLGQKLATRL 1007
Query: 1500 NVRPS 1514
NVRP+
Sbjct: 1008 NVRPN 1012
>gb|AAB53101.2| catalase [Brassica napus]
Length = 492
Score = 1020 bits (2638), Expect = 0.0
Identities = 482/492 (97%), Positives = 487/492 (98%)
Frame = +3
Query: 42 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLENYHLIEKVANFTRERIP 221
MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLE+YHLIEKVANFTRERIP
Sbjct: 1 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIP 60
Query: 222 ERVVHARGISAKGFFEVTHNISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR 401
ERVVHARGISAKGFFEVTH+ISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR
Sbjct: 61 ERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR 120
Query: 402 GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP 581
GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP
Sbjct: 121 GFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLP 180
Query: 582 ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEA 761
ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTL++KSGKVLFVKFHWKPTCGIKNLTDEEA
Sbjct: 181 ESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLVSKSGKVLFVKFHWKPTCGIKNLTDEEA 240
Query: 762 KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL 941
KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL
Sbjct: 241 KVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPL 300
Query: 942 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY 1121
QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY
Sbjct: 301 QPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNY 360
Query: 1122 LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKC 1301
LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVP P SYTGIRTKC
Sbjct: 361 LQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPIPNKSYTGIRTKC 420
Query: 1302 VIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQ 1481
+IKKENNFKQ GDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIR IWISYWSQADRSLGQ
Sbjct: 421 IIKKENNFKQPGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRSIWISYWSQADRSLGQ 480
Query: 1482 KLASRLNVRPSI 1517
KLASRLNVRPSI
Sbjct: 481 KLASRLNVRPSI 492
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 129
effective length of database: 256,451,607
effective search space used: 118480642434
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)