BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.1.cl.134.Contig1
(2101 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189108.1| abscisic acid-insensitive protein 3 (ABI3)... 811 0.0
emb|CAA05484.1| ABI3 protein [Arabidopsis thaliana] 806 0.0
emb|CAA05921.1| ABI3 [Populus balsamifera subsp. trichocarpa] 254 4e-66
emb|CAA05922.1| ABI3 [Populus balsamifera subsp. trichocarpa] 253 1e-65
dbj|BAB96578.1| abscisic acid insensitive 3-like factor [Ph... 223 1e-56
>ref|NP_189108.1| abscisic acid-insensitive protein 3 (ABI3); protein id: At3g24650.1
[Arabidopsis thaliana]|gi|584707|sp|Q01593|ABI3_ARATH
Abscisic acid-insensitive protein 3|gi|320551|pir||JQ1676
ABI3 protein - Arabidopsis
thaliana|gi|16146|emb|CAA48241.1| ABI3 protein
[Arabidopsis thaliana]|gi|9279793|dbj|BAB01214.1|
abscisic acid-insensitive protein 3 [Arabidopsis
thaliana]
Length = 720
Score = 811 bits (2095), Expect = 0.0
Identities = 425/560 (75%), Positives = 425/560 (75%)
Frame = -1
Query: 1975 MKSLHVAGNAGDLAEDCGILGGDADDTVLMDGIDEVGREIWLXXXXXXXXXXXXXXXXDL 1796
MKSLHVA NAGDLAEDCGILGGDADDTVLMDGIDEVGREIWL DL
Sbjct: 1 MKSLHVAANAGDLAEDCGILGGDADDTVLMDGIDEVGREIWLDDHGGDNNHVHGHQDDDL 60
Query: 1795 IVHHDPSIFYGDLPTLPDFPCMXXXXXXXXSPAPVNAIVXXXXXXXXXXXXXXXXXXXAI 1616
IVHHDPSIFYGDLPTLPDFPCM SPAPVNAIV AI
Sbjct: 61 IVHHDPSIFYGDLPTLPDFPCMSSSSSSSTSPAPVNAIVSSASSSSAASSSTSSAASWAI 120
Query: 1615 LRSDGEDPTPNQNQYASGNCDDSSGALQSTASMEIPLDSSQXXXXXXXXGDCIDMMETFG 1436
LRSDGEDPTPNQNQYASGNCDDSSGALQSTASMEIPLDSSQ GDCIDMMETFG
Sbjct: 121 LRSDGEDPTPNQNQYASGNCDDSSGALQSTASMEIPLDSSQGFGCGEGGGDCIDMMETFG 180
Query: 1435 YMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPMMENNSGGDMQMMNSSL 1256
YMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPMMENNSGGDMQMMNSSL
Sbjct: 181 YMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPMMENNSGGDMQMMNSSL 240
Query: 1255 EQDDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGKEAMKQLLKLILEW 1076
EQDDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGKEAMKQLLKLILEW
Sbjct: 241 EQDDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGKEAMKQLLKLILEW 300
Query: 1075 VQTNHLQXXXXXXXXTNLSYXXXXXXXXXXXXXXXXXXXXXXXDQTCFSPSTWVPPPPQQ 896
VQTNHLQ TNLSY DQTCFSPSTWVPPPPQQ
Sbjct: 301 VQTNHLQRRRTTTTTTNLSYQQSFQQDPFQNPNPNNNNLIPPSDQTCFSPSTWVPPPPQQ 360
Query: 895 QAFVSDPGFGYMPAPNYXXXXXXXXXXXXXXXXXXXXXXXXXXXQQFPMPPTSQYNQFGD 716
QAFVSDPGFGYMPAPNY QQFPMPPTSQYNQFGD
Sbjct: 361 QAFVSDPGFGYMPAPNYPPQPEFLPLLESPPSWPPPPQSGPMPHQQFPMPPTSQYNQFGD 420
Query: 715 PTGFNGYNMNPYQYPYVPAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHHHRHXXXX 536
PTGFNGYNMNPYQYPYVPAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHHHRH
Sbjct: 421 PTGFNGYNMNPYQYPYVPAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHHHRHNNNN 480
Query: 535 XXXXXXXXXQTQIGETCAAVAPQLNPVATTATGGTWMYWXXXXXXXXXXXXVMETQLPTM 356
QTQIGETCAAVAPQLNPVATTATGGTWMYW VMETQLPTM
Sbjct: 481 NNNNNNQQNQTQIGETCAAVAPQLNPVATTATGGTWMYWPNVPAVPPQLPPVMETQLPTM 540
Query: 355 DRAGSASAMPRQQVVPDRRQ 296
DRAGSASAMPRQQVVPDRRQ
Sbjct: 541 DRAGSASAMPRQQVVPDRRQ 560
Score = 66.6 bits (161), Expect = 1e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 95 GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK 3
GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK
Sbjct: 561 GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK 591
>emb|CAA05484.1| ABI3 protein [Arabidopsis thaliana]
Length = 715
Score = 806 bits (2081), Expect = 0.0
Identities = 424/560 (75%), Positives = 425/560 (75%)
Frame = -1
Query: 1975 MKSLHVAGNAGDLAEDCGILGGDADDTVLMDGIDEVGREIWLXXXXXXXXXXXXXXXXDL 1796
MKSLHVA NAGDLAEDCGILGGDADDTVLMDGIDEVGREIWL DL
Sbjct: 1 MKSLHVAANAGDLAEDCGILGGDADDTVLMDGIDEVGREIWLDDHGGDNNHVHGHQDDDL 60
Query: 1795 IVHHDPSIFYGDLPTLPDFPCMXXXXXXXXSPAPVNAIVXXXXXXXXXXXXXXXXXXXAI 1616
IVHHDPSIFYGDLPTLPDFPCM SPAPVNAIV AI
Sbjct: 61 IVHHDPSIFYGDLPTLPDFPCMSSSSSSSTSPAPVNAIVSSASSSSAASSSTSSAASWAI 120
Query: 1615 LRSDGEDPTPNQNQYASGNCDDSSGALQSTASMEIPLDSSQXXXXXXXXGDCIDMMETFG 1436
LRSDGEDPTPNQNQYASGNCDDSSGALQSTASMEIPLDSSQ GDCIDMMETFG
Sbjct: 121 LRSDGEDPTPNQNQYASGNCDDSSGALQSTASMEIPLDSSQGFGCGEGGGDCIDMMETFG 180
Query: 1435 YMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPMMENNSGGDMQMMNSSL 1256
YMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPM+ENNSGGDMQMMNSSL
Sbjct: 181 YMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPMLENNSGGDMQMMNSSL 240
Query: 1255 EQDDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGKEAMKQLLKLILEW 1076
EQDDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGKEAMKQLLKLILEW
Sbjct: 241 EQDDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGKEAMKQLLKLILEW 300
Query: 1075 VQTNHLQXXXXXXXXTNLSYXXXXXXXXXXXXXXXXXXXXXXXDQTCFSPSTWVPPPPQQ 896
VQTNHLQ TNLSY DQTCFSPSTWVPPPPQQ
Sbjct: 301 VQTNHLQRRRTTTTTTNLSYQQSFQQDPFQNPNPNNNNLIPPSDQTCFSPSTWVPPPPQQ 360
Query: 895 QAFVSDPGFGYMPAPNYXXXXXXXXXXXXXXXXXXXXXXXXXXXQQFPMPPTSQYNQFGD 716
QAFVSDPGFGYMPAPNY QQFPMPPTSQYNQFGD
Sbjct: 361 QAFVSDPGFGYMPAPNYPPQPEFLPLLESPPSWPPPPQSGPMPHQQFPMPPTSQYNQFGD 420
Query: 715 PTGFNGYNMNPYQYPYVPAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHHHRHXXXX 536
PTGFNGYNMNPYQYPYVPAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHHHRH
Sbjct: 421 PTGFNGYNMNPYQYPYVPAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHHHRH-NNN 479
Query: 535 XXXXXXXXXQTQIGETCAAVAPQLNPVATTATGGTWMYWXXXXXXXXXXXXVMETQLPTM 356
QTQIGETCAAVAPQLNPVATTATGGTWMYW VMETQLPTM
Sbjct: 480 NNNNNNQQNQTQIGETCAAVAPQLNPVATTATGGTWMYWPNVPAVPPQLPPVMETQLPTM 539
Query: 355 DRAGSASAMPRQQVVPDRRQ 296
DRAGSASAMPRQQVVPDRRQ
Sbjct: 540 DRAGSASAMPRQQVVPDRRQ 559
Score = 66.6 bits (161), Expect = 1e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 95 GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK 3
GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK
Sbjct: 560 GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK 590
>emb|CAA05921.1| ABI3 [Populus balsamifera subsp. trichocarpa]
Length = 735
Score = 254 bits (649), Expect = 4e-66
Identities = 193/552 (34%), Positives = 240/552 (42%), Gaps = 50/552 (9%)
Frame = -1
Query: 1783 DPSIFYGDLPTLPDFPCMXXXXXXXXSPAPVNAIVXXXXXXXXXXXXXXXXXXX-AILRS 1607
D SIFY D P LPDFPCM +PAPVNAI A+L+S
Sbjct: 55 DVSIFYEDFPPLPDFPCMSSSSSSSSTPAPVNAITSSSSSSCSSSASSSSSAAAWAVLKS 114
Query: 1606 DGEDPTPNQNQ-----YASGNCDD------------SSGALQSTASMEIPLDSSQXXXXX 1478
+ E+ +Q Y N DD S+ AL ST SME+P Q
Sbjct: 115 EAEEDVEKNHQHRNHCYHHNNNDDFNSQAMDDPVDVSTAALSSTCSMEVPQPPDQAMELG 174
Query: 1477 XXXGDCIDMMETFGYMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPMME 1298
+C+D+ME FGY+DLL+SN+FFD S+IF D+ M+Q +DQ+ + +
Sbjct: 175 I---ECMDVMEDFGYIDLLESNDFFDPSSIFHPDEGLFEEFQMEQN--EPQDQLQLQYYD 229
Query: 1297 NNSGGDM-------QMMNSSLEQDDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESA 1139
+G + Q + + DDLA VFL+WLK+NKETVSA+DLR+VK+KK TIE A
Sbjct: 230 EQAGNEEITKGKNDQEADHQGGRSDDLAMVFLDWLKSNKETVSADDLRRVKLKKTTIECA 289
Query: 1138 ARRLGGGKEAMKQLLKLILEWVQTNHLQXXXXXXXXTNLSYXXXXXXXXXXXXXXXXXXX 959
ARRLGGGKE MKQLLKLIL+WVQTNHLQ +N++
Sbjct: 290 ARRLGGGKEGMKQLLKLILQWVQTNHLQRRRMRESSSNVNLLYPYNQDPLQNQNPNPNSN 349
Query: 958 X------XXXDQTCFSPSTW-VPPPPQQQAFVSDPGFGYMPAPNYXXXXXXXXXXXXXXX 800
CF+ S W V PPP A + G+ P +
Sbjct: 350 LNCNPIPADHSNPCFTQSPWNVAPPPYLAADPATVMPGFSPMVGFMGDPFSNGSSNINGH 409
Query: 799 XXXXXXXXXXXXQQFPMPPTSQ------YNQFGDPT---------GFNGYNMNPYQYPYV 665
Q + P SQ +N F D F GY N Y Y YV
Sbjct: 410 PYGTPQDCNHMLQSYQTWPPSQFHSASHFNSFADNNLQSAQPQNPAFTGYG-NQYPYQYV 468
Query: 664 PAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHH---HRHXXXXXXXXXXXXXQTQIG 494
PA D RL RL SSATKEARKKRMARQRRFLS+H + H +
Sbjct: 469 PAN--GDNRLTRLGSSATKEARKKRMARQRRFLSYHRNQNHHNIQHQNQGAGDPHERLSD 526
Query: 493 ETCAAVAPQLNPVATTATGGTWMYWXXXXXXXXXXXXVMETQLPTMDRAGSASAMPRQQV 314
+ A Q NP G+W+YW PT GSAS V
Sbjct: 527 DPNGAPTGQSNP-------GSWVYW------------------PTAAGGGSASTTVDAPV 561
Query: 313 VPDRRQVDMHNH 278
Q +NH
Sbjct: 562 DRPAMQAQTNNH 573
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/31 (96%), Positives = 31/31 (99%)
Frame = -3
Query: 95 GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK 3
GWKPEKNLRFLLQKVLKQSDVG+LGRIVLPK
Sbjct: 583 GWKPEKNLRFLLQKVLKQSDVGSLGRIVLPK 613
>emb|CAA05922.1| ABI3 [Populus balsamifera subsp. trichocarpa]
Length = 734
Score = 253 bits (645), Expect = 1e-65
Identities = 193/551 (35%), Positives = 239/551 (43%), Gaps = 49/551 (8%)
Frame = -1
Query: 1783 DPSIFYGDLPTLPDFPCMXXXXXXXXSPAPVNAIVXXXXXXXXXXXXXXXXXXX-AILRS 1607
D SIF+ D P LPDFPCM +PAPVNAI A+L+S
Sbjct: 55 DVSIFHEDFPPLPDFPCMSSSSSSSSTPAPVNAITSSSSSSCSSSASSSSSAAAWAVLKS 114
Query: 1606 DGEDPTPNQNQ-----YASGNCDD------------SSGALQSTASMEIPLDSSQXXXXX 1478
+ E+ +Q Y N DD S+ AL ST SME+P Q
Sbjct: 115 EAEEDVEKNHQHRNHCYHHNNNDDFNSQAMDDPVDVSTAALSSTCSMEVPQPPDQAMELG 174
Query: 1477 XXXGDCIDMMETFGYMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPMME 1298
+C+D+ME FGY+DLL+SN+FFD S+IF D+ M+Q +DQ+ + E
Sbjct: 175 I---ECMDVMEDFGYIDLLESNDFFDPSSIFHPDEGLFEEFQMEQN--EPQDQLQLQYDE 229
Query: 1297 NNSGGDMQMMNSSLEQD------DDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAA 1136
++ + E D DDLA VFL+WLK+NKETVSA+DLR+VK+KK TIE AA
Sbjct: 230 QAGNEEITKGKNDQEADHQGGRSDDLAMVFLDWLKSNKETVSADDLRRVKLKKTTIECAA 289
Query: 1135 RRLGGGKEAMKQLLKLILEWVQTNHLQXXXXXXXXTNLSYXXXXXXXXXXXXXXXXXXXX 956
RRLGGGKE MKQLLKLIL+WVQTNHLQ +N++
Sbjct: 290 RRLGGGKEGMKQLLKLILQWVQTNHLQRRRMRESSSNVNLLYPYNQDPLQNQNPNPNSNL 349
Query: 955 ------XXXDQTCFSPSTW-VPPPPQQQAFVSDPGFGYMPAPNYXXXXXXXXXXXXXXXX 797
CF+ S W V PPP A + G+ P +
Sbjct: 350 NCNPIPADHSNPCFTQSPWNVAPPPYLAADPATVMPGFSPMVGFMGDPFSNGSSNINGHP 409
Query: 796 XXXXXXXXXXXQQFPMPPTSQ------YNQFGDPT---------GFNGYNMNPYQYPYVP 662
Q + P SQ +N F D F GY N Y Y YVP
Sbjct: 410 YGTPQDCNHMLQSYQTWPPSQFHSASHFNSFADNNLQSAQPQNPAFTGYG-NQYPYQYVP 468
Query: 661 AGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHH---HRHXXXXXXXXXXXXXQTQIGE 491
A D RL RL SSATKEARKKRMARQRRFLS+H + H + +
Sbjct: 469 AN--GDNRLTRLGSSATKEARKKRMARQRRFLSYHRNQNHHNIQHQNQGAGDPHERLSDD 526
Query: 490 TCAAVAPQLNPVATTATGGTWMYWXXXXXXXXXXXXVMETQLPTMDRAGSASAMPRQQVV 311
A Q NP G+W+YW PT GSAS V
Sbjct: 527 PNGAPTGQSNP-------GSWVYW------------------PTAAGGGSASTTVDAPVD 561
Query: 310 PDRRQVDMHNH 278
Q +NH
Sbjct: 562 RPAMQAQTNNH 572
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/31 (96%), Positives = 31/31 (99%)
Frame = -3
Query: 95 GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK 3
GWKPEKNLRFLLQKVLKQSDVG+LGRIVLPK
Sbjct: 582 GWKPEKNLRFLLQKVLKQSDVGSLGRIVLPK 612
>dbj|BAB96578.1| abscisic acid insensitive 3-like factor [Phaseolus vulgaris]
Length = 755
Score = 223 bits (567), Expect = 1e-56
Identities = 168/514 (32%), Positives = 234/514 (44%), Gaps = 58/514 (11%)
Frame = -1
Query: 1786 HDPSIFYGDLPTLPDFPCMXXXXXXXXS-PAPVNAIVXXXXXXXXXXXXXXXXXXX-AIL 1613
++ S+FY D P LPDFPCM + P P+ A+L
Sbjct: 54 NEASMFYADFPPLPDFPCMSSSSSSSSAAPLPLKTTTCSTTTTATTATSSSSSSSSWAVL 113
Query: 1612 RSDGEDPTPNQNQYASGNCDDS--SGALQSTASMEIPLDSSQXXXXXXXXGDCI-DMMET 1442
+SD E+ + + +G+ D + AL STASM I + G+C+ D+M+T
Sbjct: 114 KSDVEEDV--EKNHCNGSMQDQFDATALSSTASMGISQQQNPDPGLGGSVGECMEDVMDT 171
Query: 1441 FGYMDLLDSNEFFDTSAIFSQDDDTQNP----NLMDQTLERQEDQVVVPMMENNSGGDMQ 1274
FGYM+LL++N+FFD ++IF Q++++++P ++++ + QE+Q + + N+ D +
Sbjct: 172 FGYMELLEANDFFDPASIF-QNEESEDPLIEFGVLEEQVSLQEEQHEMVHQQENTEEDRK 230
Query: 1273 MMNSSLEQ--------------DDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAA 1136
+ + + DD+++ VFLEWLK+NK++VSA DLR VK+KKATIESAA
Sbjct: 231 VPVCGVIKGEEEGGGGGGGRVVDDEMSNVFLEWLKSNKDSVSANDLRNVKLKKATIESAA 290
Query: 1135 RRLGGGKEAMKQLLKLILEWVQTNHLQXXXXXXXXTNLSYXXXXXX---XXXXXXXXXXX 965
+RLGGGKEAMKQLLKLILEWVQT+HLQ +N S
Sbjct: 291 KRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENGSNNSNALQAQFQDPSAQTKENAHTS 350
Query: 964 XXXXXXDQTCFSPST-WVPPPPQQQAFVSDPGFGYMPAPNYXXXXXXXXXXXXXXXXXXX 788
+CF+ T W+ P Q F +D +P+ Y
Sbjct: 351 GSFAPESNSCFNNQTPWLNP----QTFGTDQAPVMVPSQPYSQPVVGYVGDPYTSGSAPN 406
Query: 787 XXXXXXXXQQFP-MPPTSQY-----------NQFGDPT---------------GFNGY-- 695
P P T QY +QF + GF GY
Sbjct: 407 NITVNHNHNNNPYQPGTDQYHMLESAHSWPHSQFNVASHYSQSYGENGLFTHGGFGGYAN 466
Query: 694 NMNPYQYPYVPAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHHHRHXXXXXXXXXXX 515
N PYQ+ + P RL+RL SATKEARKKRMARQRRFLSHH H
Sbjct: 467 NQYPYQFFHGPG-----DRLMRLGPSATKEARKKRMARQRRFLSHHRNHNGNHLQNQGSD 521
Query: 514 XXQTQIGETCAA--VAPQLNPVATTATGGTWMYW 419
+ C VAP + WMYW
Sbjct: 522 PHARLGNDNCTTGLVAPH----QPNSAAANWMYW 551
Score = 61.2 bits (147), Expect = 6e-08
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 95 GWKPEKNLRFLLQKVLKQSDVGNLGRIVLPK 3
GWKPEKNLRFL+QKVLKQSDVG LG IVLPK
Sbjct: 599 GWKPEKNLRFLVQKVLKQSDVGKLGEIVLPK 629
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 130
effective length of database: 255,112,561
effective search space used: 145159047209
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)