BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.1.cl.111.Contig1
(3198 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187111.1| Mutator-like transposase; protein id: At3g... 1359 0.0
ref|NP_180622.1| putative Mutator-like transposase; protein... 798 0.0
ref|NP_172159.1| mudrA-like protein; protein id: At1g06740.... 710 0.0
ref|NP_568331.1| Expressed protein; protein id: At5g16505.1... 663 0.0
dbj|BAB91824.1| putative mutator-like transposase [Oryza sa... 639 0.0
>ref|NP_187111.1| Mutator-like transposase; protein id: At3g04605.1, supported by cDNA:
gi_18389285, supported by cDNA: gi_20465952 [Arabidopsis
thaliana]|gi|6175165|gb|AAF04891.1|AC011437_6
Mutator-like transposase [Arabidopsis
thaliana]|gi|18389286|gb|AAL67086.1| putative Mutator
transposase [Arabidopsis
thaliana]|gi|20465953|gb|AAM20162.1| putative mutator
transposase [Arabidopsis thaliana]
Length = 757
Score = 1359 bits (3517), Expect = 0.0
Identities = 667/722 (92%), Positives = 667/722 (92%)
Frame = +2
Query: 482 MANRDLMLXXXXXXXXXXXXXXXXXXXXXXXXXXNHVDVELGQGHNMDLGLAXXXXXXXE 661
MANRDLML NHVDVELGQGHNMDLGLA E
Sbjct: 1 MANRDLMLGQNRNIGIGQGQSLVLGHSHSLGLGQNHVDVELGQGHNMDLGLAHHDHDHHE 60
Query: 662 IDLGNPHDDHELDLGNSEDQDGEDXXXXXXXDYMNENEISVDQKPGHDDVDPDLVLSSQN 841
IDLGNPHDDHELDLGNSEDQDGED DYMNENEISVDQKPGHDDVDPDLVLSSQN
Sbjct: 61 IDLGNPHDDHELDLGNSEDQDGEDHHHHHHHDYMNENEISVDQKPGHDDVDPDLVLSSQN 120
Query: 842 HEFSLSDNNHQLVVGENHELDDNLELAVDSSHELEIDQHGEMVMVSTPVQARALTADMTY 1021
HEFSLSDNNHQLVVGENHELDDNLELAVDSSHELEIDQHGEMVMVSTPVQARALTADMTY
Sbjct: 121 HEFSLSDNNHQLVVGENHELDDNLELAVDSSHELEIDQHGEMVMVSTPVQARALTADMTY 180
Query: 1022 QLTVGQEFPDVKSCRRALRDMAIALHFEMQTIKSDKTRFTAKCSSDGCPWRVHAAKLPGV 1201
QLTVGQEFPDVKSCRRALRDMAIALHFEMQTIKSDKTRFTAKCSSDGCPWRVHAAKLPGV
Sbjct: 181 QLTVGQEFPDVKSCRRALRDMAIALHFEMQTIKSDKTRFTAKCSSDGCPWRVHAAKLPGV 240
Query: 1202 PTFTIRTIHESHSCGGINHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHRVHGIT 1381
PTFTIRTIHESHSCGGINHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHRVHGIT
Sbjct: 241 PTFTIRTIHESHSCGGINHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHRVHGIT 300
Query: 1382 LSYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQVKRTNPGSIASVYGSPADNCFQRLFI 1561
LSYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQVKRTNPGSIASVYGSPADNCFQRLFI
Sbjct: 301 LSYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQVKRTNPGSIASVYGSPADNCFQRLFI 360
Query: 1562 SFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPLAFGIVDEENDENW 1741
SFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPLAFGIVDEENDENW
Sbjct: 361 SFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPLAFGIVDEENDENW 420
Query: 1742 MWFLCELHNLLETNTENMPRLTILSDRQKGIVEGVEQNFPTAFHGFCMRHLSESFRKEFN 1921
MWFLCELHNLLETNTENMPRLTILSDRQKGIVEGVEQNFPTAFHGFCMRHLSESFRKEFN
Sbjct: 421 MWFLCELHNLLETNTENMPRLTILSDRQKGIVEGVEQNFPTAFHGFCMRHLSESFRKEFN 480
Query: 1922 NTLLVNYLWEAAQALTVIEFEAKILEIEEISQDAAYWIRRIPPRLWATAYFEGQRFGHLT 2101
NTLLVNYLWEAAQALTVIEFEAKILEIEEISQDAAYWIRRIPPRLWATAYFEGQRFGHLT
Sbjct: 481 NTLLVNYLWEAAQALTVIEFEAKILEIEEISQDAAYWIRRIPPRLWATAYFEGQRFGHLT 540
Query: 2102 ANIVESLNSWIAEASGLPIIQMMECIRRQLMTWFNERRETSMQWTSILVPTXXXXXXXXX 2281
ANIVESLNSWIAEASGLPIIQMMECIRRQLMTWFNERRETSMQWTSILVPT
Sbjct: 541 ANIVESLNSWIAEASGLPIIQMMECIRRQLMTWFNERRETSMQWTSILVPTAERRVAEAL 600
Query: 2282 XXXXTYQVLRANEAEFEVISHEGNNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNV 2461
TYQVLRANEAEFEVISHEGNNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNV
Sbjct: 601 ELARTYQVLRANEAEFEVISHEGNNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNV 660
Query: 2462 HRFTESCFTVATYRKTYSQTIHPIPDKSHWRELSEGDPNVNKAALDAIINPPKSLRPHPR 2641
HRFTESCFTVATYRKTYSQTIHPIPDKSHWRELSEGDPNVNKAALDAIINPPKSLRP R
Sbjct: 661 HRFTESCFTVATYRKTYSQTIHPIPDKSHWRELSEGDPNVNKAALDAIINPPKSLRPPGR 720
Query: 2642 PR 2647
PR
Sbjct: 721 PR 722
Score = 110 bits (274), Expect = 2e-22
Identities = 54/72 (75%), Positives = 54/72 (75%)
Frame = +3
Query: 2646 DKRHWRELSEGDPNVNKAALDAIINXXXXXXXXXXXXXXXXXAEDRGRVKRVVHCSRCNQ 2825
DK HWRELSEGDPNVNKAALDAIIN AEDRGRVKRVVHCSRCNQ
Sbjct: 686 DKSHWRELSEGDPNVNKAALDAIINPPKSLRPPGRPRKRRVRAEDRGRVKRVVHCSRCNQ 745
Query: 2826 TGHFRTTCAAPI 2861
TGHFRTTCAAPI
Sbjct: 746 TGHFRTTCAAPI 757
>ref|NP_180622.1| putative Mutator-like transposase; protein id: At2g30640.1
[Arabidopsis thaliana]|gi|25408094|pir||H84710
Mutator-like transposase [imported] - Arabidopsis
thaliana|gi|2880040|gb|AAC02734.1| putative Mutator-like
transposase [Arabidopsis
thaliana]|gi|20198324|gb|AAM15523.1| putative
Mutator-like transposase [Arabidopsis thaliana]
Length = 754
Score = 798 bits (2060), Expect = 0.0
Identities = 403/679 (59%), Positives = 497/679 (72%), Gaps = 22/679 (3%)
Frame = +2
Query: 677 PHDDHELDLGNSEDQD-----GEDXXXXXXXDYMNENEISVDQK-PGHDDVDP-DLVLSS 835
P + L +G S +Q+ G++ + EI Q G D+VD + S
Sbjct: 42 PLQETNLQIGVSREQNEVWNHGQEHALALQNSGTHSEEIHEKQLVEGKDEVDSQENQNES 101
Query: 836 QNHEFSLS--DN-------NHQLVVGENHELDDNLELAV------DSSHELEIDQHGEMV 970
+H F LS DN N +L + + +L+DNL+LAV D L I ++
Sbjct: 102 YDHTFDLSFPDNDDSGTSENDKLALLVSQDLNDNLQLAVGHCMNRDPLPGLNISLSQQLE 161
Query: 971 MVSTPVQARALTADMTYQLTVGQEFPDVKSCRRALRDMAIALHFEMQTIKSDKTRFTAKC 1150
+ +Q R+L + L VG EF DV +CRRALRD AIAL FEMQT+KSDKTRFTAKC
Sbjct: 162 LAPPILQCRSLQTAPEHNLIVGMEFSDVLACRRALRDAAIALRFEMQTVKSDKTRFTAKC 221
Query: 1151 SSDGCPWRVHAAKLPGVPTFTIRTIHESHSCGGINHLGHQQASVQWVASSVEQRLRENPN 1330
+S+GCPWR+H AKLPG+PTFTIRTIH SH+CGGI+HLGH QASVQWVA +V +RL+ NP+
Sbjct: 222 NSEGCPWRIHCAKLPGLPTFTIRTIHGSHTCGGISHLGHHQASVQWVADAVTERLKVNPH 281
Query: 1331 CKPKEILEEIHRVHGITLSYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQVKRTNPGSI 1510
CKPKEILE+IH+VHGITL+YKQAWRGKERIMA +RGS+EE YRLLP+YC+Q++RTNPGS+
Sbjct: 282 CKPKEILEQIHQVHGITLTYKQAWRGKERIMAAVRGSYEEDYRLLPRYCDQIRRTNPGSV 341
Query: 1511 ASVYGSPADNCFQRLFISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGA 1690
A V+GSP D FQ+ FISFQASI GFLNACRPL+GLDRT LKSKY+GTLLLATGFDG+GA
Sbjct: 342 AVVHGSPVDGSFQQFFISFQASICGFLNACRPLIGLDRTVLKSKYVGTLLLATGFDGEGA 401
Query: 1691 LFPLAFGIVDEENDENWMWFLCELHNLLETNTENMPRLTILSDRQKGIVEGVEQNFPTAF 1870
+FPLAF I+ EEND +W WFL EL LLE N+ENMP+LTILS R + IV+GV+ NFPTAF
Sbjct: 402 VFPLAFAIISEENDSSWQWFLSELRQLLEVNSENMPKLTILSSRDQSIVDGVDTNFPTAF 461
Query: 1871 HGFCMRHLSESFRKEFNNTLLVNYLWEAAQALTVIEFEAKILEIEEISQDAAYWIRRIPP 2050
HG C+ L+ES R +FNN++LVN +WEAA+ LT EFE K+ EI +IS +AA WIR I
Sbjct: 462 HGLCVHCLTESVRTQFNNSILVNLVWEAAKCLTDFEFEGKMGEIAQISPEAASWIRNIQH 521
Query: 2051 RLWATAYFEGQRFGHLTANIVESLNSWIAEASGLPIIQMMECIRRQLMTWFNERRETSMQ 2230
WAT FEG RFGHLTAN+ ESLNSW+ +ASGLPIIQM+E IRRQLMT FNERRETSMQ
Sbjct: 522 SQWATYCFEGTRFGHLTANVSESLNSWVQDASGLPIIQMLESIRRQLMTLFNERRETSMQ 581
Query: 2231 WTSILVPTXXXXXXXXXXXXXTYQVLRANEAEFEVISHEGNNIVDIRNRCCLCRGWQLYG 2410
W+ +LVP+ Y V +ANEA+FEV++ EG IVDIR R C CRGW+LYG
Sbjct: 582 WSGMLVPSAERHVLEAIEECRLYPVHKANEAQFEVMTSEGKWIVDIRCRTCYCRGWELYG 641
Query: 2411 LPCAHAVAALLSCRQNVHRFTESCFTVATYRKTYSQTIHPIPDKSHWRELSEGDPNVNKA 2590
LPC+HAVAALL+CRQNV+RFTES FTVA YR+TY++TIHP+PDK+ W+ +E +
Sbjct: 642 LPCSHAVAALLACRQNVYRFTESYFTVANYRRTYAETIHPVPDKTEWK-TTEPAGESGED 700
Query: 2591 ALDAIINPPKSLRPHPRPR 2647
+ +I PP+ LR PRP+
Sbjct: 701 GEEIVIRPPRDLRQPPRPK 719
Score = 58.5 bits (140), Expect = 6e-07
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = +3
Query: 2775 EDRGRVKRVVHCSRCNQTGHFRTTCAAPI 2861
EDRGR KRVV CSRCNQ GHFRTTC API
Sbjct: 726 EDRGRQKRVVRCSRCNQAGHFRTTCTAPI 754
>ref|NP_172159.1| mudrA-like protein; protein id: At1g06740.1 [Arabidopsis
thaliana]|gi|25406932|pir||B86202 hypothetical protein
[imported] - Arabidopsis
thaliana|gi|7523705|gb|AAF63144.1|AC011001_14 Similar to
maize transposon mudrA protein [Arabidopsis thaliana]
Length = 726
Score = 710 bits (1832), Expect = 0.0
Identities = 365/690 (52%), Positives = 482/690 (68%), Gaps = 7/690 (1%)
Frame = +2
Query: 599 ELGQGHNMDLGLAXXXXXXXEIDLGNPHDDHELDLGNSEDQDGEDXXXXXXXDYMNENEI 778
EL GH D A + +G + +EL N +D G D +N+N+
Sbjct: 29 ELFVGH--DYNSAFEQLLDINLQIGASCNGNEL-WNNLQDHRGIDETKEVACLDVNQND- 84
Query: 779 SVDQKPGHDDVDPDLVLSSQNHEFSLSDNNHQLVVGENHELDDNLELAVDSSHELEIDQH 958
P +DD + D ++ + H++ E+ + DD LEL + S E
Sbjct: 85 GYRSFPDNDDSEID-----KSTVIEATGAIHKV---ESQDTDDKLELEMSQSTEFS---- 132
Query: 959 GEMVMVSTPVQARALT-ADMTYQLTVGQEFPDVKSCRRALRDMAIALHFEMQTIKSDKTR 1135
+ VM S Q +++ A +++ VG EF D +CRRA+++ AI+L FEM+TIKSDKTR
Sbjct: 133 QKSVMPSPSSQCWSMSGAGTDHEMVVGMEFSDAYACRRAIKNAAISLRFEMRTIKSDKTR 192
Query: 1136 FTAKCSSDGCPWRVHAAKLPGVPTFTIRTIHESHSCGGINHLGHQQASVQWVASSVEQRL 1315
FTAKC+S GCPWR+H AK+ PTFTIRTIH SH+CGGI+HLGHQQASVQWVA V ++L
Sbjct: 193 FTAKCNSKGCPWRIHCAKVSNAPTFTIRTIHGSHTCGGISHLGHQQASVQWVADVVAEKL 252
Query: 1316 RENPNCKPKEILEEIHRVHGITLSYKQAWRGKERIMA-----TMRGSFEEGYRLLPQYCE 1480
+ENP+ KPKEILEEI+RVHGI+LSYKQAWRGKERIMA T+RGSFEE YRLLPQYC+
Sbjct: 253 KENPHFKPKEILEEIYRVHGISLSYKQAWRGKERIMATLRGSTLRGSFEEEYRLLPQYCD 312
Query: 1481 QVKRTNPGSIASVYGSPADNCFQRLFISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLL 1660
+++R+NPGS+A V+ +P D CFQ LFISFQASI GFLNACRPL+ LD T LKSKY GTLL
Sbjct: 313 EIRRSNPGSVAVVHVNPIDGCFQHLFISFQASISGFLNACRPLIALDSTVLKSKYPGTLL 372
Query: 1661 LATGFDGDGALFPLAFGIVDEENDENWMWFLCELHNLLETNTENMPRLTILSDRQKGIVE 1840
LATGFDGDGA+FPLAF IV+EEND+NW FL EL +L+ ENMP+LTILS ++ +V+
Sbjct: 373 LATGFDGDGAVFPLAFAIVNEENDDNWHRFLSELRKILD---ENMPKLTILSSGERPVVD 429
Query: 1841 GVEQNFPTAFHGFCMRHLSESFRKEFNNTLLVNYLWEAAQALTVIEFEAKILEIEEISQD 2020
GVE NFP AFHGFC+ +L+E F++EF +++LV+ WEAA LTV+EF++KI +IE+IS +
Sbjct: 430 GVEANFPAAFHGFCLHYLTERFQREFQSSVLVDLFWEAAHCLTVLEFKSKINKIEQISPE 489
Query: 2021 AAYWIRRIPPRLWATAYFEGQRFGHLTANIV-ESLNSWIAEASGLPIIQMMECIRRQLMT 2197
A+ WI+ P WA++YFEG RFG LTAN++ ESL++W+ + SGLPIIQ MECI R L+
Sbjct: 490 ASLWIQNKSPARWASSYFEGTRFGQLTANVITESLSNWVEDTSGLPIIQTMECIHRHLIN 549
Query: 2198 WFNERRETSMQWTSILVPTXXXXXXXXXXXXXTYQVLRANEAEFEVISHEGNNIVDIRNR 2377
ERRETS+ W+++LVP+ ++V RANEAEFEV++ EGN +V+I N
Sbjct: 550 MLKERRETSLHWSNVLVPSAEKQMLAAIEQSRAHRVYRANEAEFEVMTCEGNVVVNIENC 609
Query: 2378 CCLCRGWQLYGLPCAHAVAALLSCRQNVHRFTESCFTVATYRKTYSQTIHPIPDKSHWRE 2557
CLC WQ+YGLPC+HAV ALLSC ++V+R+TESCFTV YR+ Y++T+ PI DK W+E
Sbjct: 610 SCLCGRWQVYGLPCSHAVGALLSCEEDVYRYTESCFTVENYRRAYAETLEPISDKVQWKE 669
Query: 2558 LSEGDPNVNKAALDAIINPPKSLRPHPRPR 2647
N ++ + +I PK+++ PR R
Sbjct: 670 ------NDSERDSENVIKTPKAMKGAPRKR 693
Score = 60.8 bits (146), Expect = 1e-07
Identities = 25/30 (83%), Positives = 27/30 (89%)
Frame = +3
Query: 2772 AEDRGRVKRVVHCSRCNQTGHFRTTCAAPI 2861
AEDR RV+RVVHC RCNQTGHFRTTC AP+
Sbjct: 697 AEDRDRVRRVVHCGRCNQTGHFRTTCTAPM 726
>ref|NP_568331.1| Expressed protein; protein id: At5g16505.1, supported by cDNA:
gi_16648944, supported by cDNA: gi_20259875 [Arabidopsis
thaliana]|gi|9759134|dbj|BAB09619.1| mutator-like
transposase-like protein [Arabidopsis
thaliana]|gi|16648945|gb|AAL24324.1| mutator-like
transposase-like protein [Arabidopsis
thaliana]|gi|20259876|gb|AAM13285.1| mutator-like
transposase-like protein [Arabidopsis thaliana]
Length = 597
Score = 663 bits (1711), Expect(2) = 0.0
Identities = 318/555 (57%), Positives = 389/555 (69%)
Frame = +2
Query: 1025 LTVGQEFPDVKSCRRALRDMAIALHFEMQTIKSDKTRFTAKCSSDGCPWRVHAAKLPGVP 1204
L VG+EFPDV++CRR L+D+AIALHF+++ +KSD++RF AKCS +GCPWR+HAAK PGV
Sbjct: 25 LAVGKEFPDVETCRRTLKDLAIALHFDLRIVKSDRSRFIAKCSKEGCPWRIHAAKCPGVQ 84
Query: 1205 TFTIRTIHESHSCGGINHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHRVHGITL 1384
TFT+RT++ H+C G+ L HQQASV WVA SVE R+R+NP KPKEIL++I HG+ +
Sbjct: 85 TFTVRTLNSEHTCEGVRDLHHQQASVGWVARSVEARIRDNPQYKPKEILQDIRDEHGVAV 144
Query: 1385 SYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQVKRTNPGSIASVYGSPADNCFQRLFIS 1564
SY QAWRGKER MA + G++EEGYR LP YCEQ+K NPGS ASV +NCFQRLFI+
Sbjct: 145 SYMQAWRGKERSMAALHGTYEEGYRFLPAYCEQIKLVNPGSFASVSALGPENCFQRLFIA 204
Query: 1565 FQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPLAFGIVDEENDENWM 1744
++A I GF ++CRPLL LDR +LK KYLG +L A D D LFPLA IVD E+DENW
Sbjct: 205 YRACISGFFSSCRPLLELDRAHLKGKYLGAILCAAAVDADDGLFPLAIAIVDNESDENWS 264
Query: 1745 WFLCELHNLLETNTENMPRLTILSDRQKGIVEGVEQNFPTAFHGFCMRHLSESFRKEFNN 1924
WFL EL LL NT++MP+LTILS+RQ +VE VE +FPTAFHGFC+R++SE+FR F N
Sbjct: 265 WFLSELRKLLGMNTDSMPKLTILSERQSAVVEAVETHFPTAFHGFCLRYVSENFRDTFKN 324
Query: 1925 TLLVNYLWEAAQALTVIEFEAKILEIEEISQDAAYWIRRIPPRLWATAYFEGQRFGHLTA 2104
T LVN W A ALT EFE K E+ EISQD W P LWA AYF+G R+GH
Sbjct: 325 TKLVNIFWSAVYALTPAEFETKSNEMIEISQDVVQWFELYLPHLWAVAYFQGVRYGHFGL 384
Query: 2105 NIVESLNSWIAEASGLPIIQMMECIRRQLMTWFNERRETSMQWTSILVPTXXXXXXXXXX 2284
I E L +W E LPIIQMME IR Q+ +WF+ RRE SM W SILVP+
Sbjct: 385 GITEVLYNWALECHELPIIQMMEHIRHQISSWFDNRRELSMGWNSILVPSAERRITEAVA 444
Query: 2285 XXXTYQVLRANEAEFEVISHEGNNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNVH 2464
YQVLRANE EFE++S E NIVDIR R C CR WQ+YGLPCAHA AAL+SC +NVH
Sbjct: 445 DARCYQVLRANEVEFEIVSTERTNIVDIRTRDCSCRRWQIYGLPCAHAAAALISCGRNVH 504
Query: 2465 RFTESCFTVATYRKTYSQTIHPIPDKSHWRELSEGDPNVNKAALDAIINPPKSLRPHPRP 2644
F E CFTV++Y++TYSQ I IPD+S W++ E I PPK+ RP RP
Sbjct: 505 LFAEPCFTVSSYQQTYSQMIGEIPDRSLWKDEGE---EAGGGVESLRIRPPKTRRPPGRP 561
Query: 2645 R*KTLERAF*RRSKR 2689
+ K + +R KR
Sbjct: 562 KKKVVRVENLKRPKR 576
Score = 32.7 bits (73), Expect(2) = 0.0
Identities = 13/29 (44%), Positives = 17/29 (57%)
Frame = +3
Query: 2775 EDRGRVKRVVHCSRCNQTGHFRTTCAAPI 2861
E+ R KR+V C RC+ GH + C PI
Sbjct: 569 ENLKRPKRIVQCGRCHLLGHSQKKCTQPI 597
>dbj|BAB91824.1| putative mutator-like transposase [Oryza sativa (japonica
cultivar-group)]|gi|20804630|dbj|BAB92320.1| putative
Mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 609
Score = 639 bits (1647), Expect(2) = 0.0
Identities = 303/556 (54%), Positives = 388/556 (69%), Gaps = 1/556 (0%)
Frame = +2
Query: 1025 LTVGQEFPDVKSCRRALRDMAIALHFEMQTIKSDKTRFTAKCSSDGCPWRVHAAKLPGVP 1204
L +GQEF DV +CRRA++DMAIA+HFE++ +KSD++RF AKC+ +GCPWRVH AK GVP
Sbjct: 36 LVIGQEFVDVHACRRAVKDMAIAMHFELRVVKSDRSRFIAKCAREGCPWRVHVAKCHGVP 95
Query: 1205 TFTIRTIHESHSCGGINHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHRVHGITL 1384
TFT+RT+H H+C G+ L H QA+V WVA SVE LR+NP KPKEIL++I HG+ +
Sbjct: 96 TFTVRTLHGEHTCDGVRDLHHHQATVGWVARSVEATLRDNPQYKPKEILQDIREQHGVAV 155
Query: 1385 SYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQVKRTNPGSIASVYGSPADNCFQRLFIS 1564
SY QAWRGKER MA + G+ E+GYR LP YCEQ+ +TNPGS+A G+ DN FQRLF+S
Sbjct: 156 SYMQAWRGKERSMAAVHGTLEDGYRFLPAYCEQIVQTNPGSVAIYKGTGPDNSFQRLFVS 215
Query: 1565 FQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPLAFGIVDEENDENWM 1744
F ASI+GFLNACRPLL +D+ LK KYLGTLL A+ D + +FPLAFGIVD E+DENWM
Sbjct: 216 FHASIHGFLNACRPLLEIDKADLKGKYLGTLLCASAVDAENMMFPLAFGIVDAESDENWM 275
Query: 1745 WFLCELHNLLETNTENMPRLTILSDRQKGIVEGVEQNFPTAFHGFCMRHLSESFRKEFNN 1924
WF EL +L NT+ MP LTILS+RQ +VE VE NFPTAFHGFC+R++SE+FR EF N
Sbjct: 276 WFFSELRKMLGVNTDKMPVLTILSERQSQVVEAVEVNFPTAFHGFCLRYVSENFRDEFKN 335
Query: 1925 TLLVNYLWEAAQALTVIEFEAKILEIEEISQDAAYWIRRIPPRLWATAYFEGQRFGHLTA 2104
L+N W A ALT EF++K+ ++ ++ QD W +R PP LWA +YFEG R+GH
Sbjct: 336 PKLLNIFWSAVYALTAAEFDSKVNDMVQV-QDVMPWFQRFPPNLWAVSYFEGIRYGHFNL 394
Query: 2105 NIVESLNSWIAEASGLPIIQMMECIRRQLMTWFNERRETSMQWTSILVPTXXXXXXXXXX 2284
I E L +W E PI+Q +E I+ QL WF ER+ ++ + SILVP+
Sbjct: 395 GITEILYNWAMECHEFPIVQTVEHIKHQLTCWFVERQNLALSYNSILVPSAEKLISEAIA 454
Query: 2285 XXXTYQVLRANEAEFEVISHEGNNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNVH 2464
YQVLRAN+ EFE++S E NIVD + RCC CR WQ+YG+PCAHAVAALLSC ++
Sbjct: 455 DSGCYQVLRANKVEFEIVSSERTNIVDTQARCCSCRRWQIYGIPCAHAVAALLSCGEDPR 514
Query: 2465 RFTESCFTVATYRKTYSQTIHPIPDKSHWR-ELSEGDPNVNKAALDAIINPPKSLRPHPR 2641
+ CF++ YR+TYSQ I+ IPD+S W S +KA A++ PPK RP R
Sbjct: 515 LYAHECFSIMKYRETYSQPIYSIPDRSQWNLPFSFAQGAGSKAY--AVLRPPKIRRPPGR 572
Query: 2642 PR*KTLERAF*RRSKR 2689
P+ K L+ +R KR
Sbjct: 573 PKMKILKIESLKRPKR 588
Score = 28.9 bits (63), Expect(2) = 0.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 2775 EDRGRVKRVVHCSRCNQTGHFRTTCA 2852
E R KR+V C RC+ GH + C+
Sbjct: 581 ESLKRPKRIVQCGRCHLLGHSQKKCS 606
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 134
effective length of database: 249,756,377
effective search space used: 232523186987
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)