BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PTA.CL.1.cl.104.Contig1
         (2135 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK32824.1|AF361811_1  AT3g06720/F3E22_14 [Arabidopsis th...  1049   0.0  
pir||T52098  probable nuclear transport factor importin alph...  1036   0.0  
gb|AAK38727.1|AF369707_1  importin alpha 2 [Capsicum annuum]      876   0.0  
ref|NP_187328.1|  importin alpha; protein id: At3g06720.2, s...   876   0.0  
pir||T52102  probable nuclear transport factor importin alph...   875   0.0  
>gb|AAK32824.1|AF361811_1 AT3g06720/F3E22_14 [Arabidopsis thaliana]|gi|16974501|gb|AAL31160.1|
            AT3g06720/F3E22_14 [Arabidopsis thaliana]
          Length = 535

 Score = 1049 bits (2713), Expect = 0.0
 Identities = 527/535 (98%), Positives = 527/535 (98%)
 Frame = +1

Query: 139  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ 318
            MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ
Sbjct: 1    MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ 60

Query: 319  FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG 498
            FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG
Sbjct: 61   FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG 120

Query: 499  VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR 678
            VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR
Sbjct: 121  VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR 180

Query: 679  EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP 858
            EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP
Sbjct: 181  EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP 240

Query: 859  PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQH 1038
            PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQH
Sbjct: 241  PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQH 300

Query: 1039 QSPSVLIPALRSIGNIVTGDDLQTQCVISHGAXXXXXXXXTHNHKKSIKKEACWTISNIT 1218
            QSPSVLIPALRSIGNIVTGDDLQTQCVISHGA        THNHKKSIKKEACWTISNIT
Sbjct: 301  QSPSVLIPALRSIGNIVTGDDLQTQCVISHGALLSLLSLLTHNHKKSIKKEACWTISNIT 360

Query: 1219 AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK 1398
            AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK
Sbjct: 361  AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK 420

Query: 1399 PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ 1578
            PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ
Sbjct: 421  PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ 480

Query: 1579 SHDNSEIYEKAVKILETYWLEEEDETLPPGDPSAQGFQFGGGNDAAVPPGGFNFQ 1743
            SHDNSEIYEKAVKILETYWLEEEDETLPPGDPSAQGFQFGGGNDAAVPPGGFNFQ
Sbjct: 481  SHDNSEIYEKAVKILETYWLEEEDETLPPGDPSAQGFQFGGGNDAAVPPGGFNFQ 535
>pir||T52098 probable nuclear transport factor importin alpha [imported] -
            Arabidopsis thaliana|gi|2950210|emb|CAA74965.1| Importin
            alpha-like protein [Arabidopsis thaliana]
          Length = 535

 Score = 1036 bits (2680), Expect = 0.0
 Identities = 522/535 (97%), Positives = 523/535 (97%)
 Frame = +1

Query: 139  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ 318
            MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ
Sbjct: 1    MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ 60

Query: 319  FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG 498
            FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG
Sbjct: 61   FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG 120

Query: 499  VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR 678
            VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR
Sbjct: 121  VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR 180

Query: 679  EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP 858
            EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP
Sbjct: 181  EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP 240

Query: 859  PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQH 1038
            PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDK+QSVIEAGVVPRLVELLQH
Sbjct: 241  PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKVQSVIEAGVVPRLVELLQH 300

Query: 1039 QSPSVLIPALRSIGNIVTGDDLQTQCVISHGAXXXXXXXXTHNHKKSIKKEACWTISNIT 1218
            QSPSVLIPALRSIGN VTGDDLQTQCVI   A        THNHKKSIKKEACWTISNIT
Sbjct: 301  QSPSVLIPALRSIGNNVTGDDLQTQCVIKSCAPPSLLGLLTHNHKKSIKKEACWTISNIT 360

Query: 1219 AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK 1398
            AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK
Sbjct: 361  AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK 420

Query: 1399 PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ 1578
            PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ
Sbjct: 421  PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ 480

Query: 1579 SHDNSEIYEKAVKILETYWLEEEDETLPPGDPSAQGFQFGGGNDAAVPPGGFNFQ 1743
            SHDNSEIYEKAVKILETYWLEEEDETLPPGDPSAQGFQFGGGNDAAVPPGGFNFQ
Sbjct: 481  SHDNSEIYEKAVKILETYWLEEEDETLPPGDPSAQGFQFGGGNDAAVPPGGFNFQ 535
>gb|AAK38727.1|AF369707_1 importin alpha 2 [Capsicum annuum]
          Length = 529

 Score =  876 bits (2264), Expect = 0.0
 Identities = 445/534 (83%), Positives = 479/534 (89%)
 Frame = +1

Query: 139  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ 318
            MSLRP+A+TEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESL KKRREGLQA Q  Q
Sbjct: 1    MSLRPSARTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLLKKRREGLQAQQ--Q 58

Query: 319  FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG 498
              PS++  +STVEKKL SLP+MV GVWS D +LQLEA TQFRKLLSIERSPPIEEVI +G
Sbjct: 59   QFPSNLQ-TSTVEKKLASLPSMVAGVWSTDNNLQLEANTQFRKLLSIERSPPIEEVIQSG 117

Query: 499  VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR 678
            VVPRFVEFL RED+PQLQFEAAWALTNIASGTSENT+VVI+HGAVPIFV+LL S SDDVR
Sbjct: 118  VVPRFVEFLLREDFPQLQFEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLGSPSDDVR 177

Query: 679  EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP 858
            EQAVWALGNVAGDSPRCRDLVL  GALIPLL+QLNEHAKLSMLRNATWTLSNFCRGKPQP
Sbjct: 178  EQAVWALGNVAGDSPRCRDLVLSNGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQP 237

Query: 859  PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQH 1038
            PF+QVRPAL AL+RL+HSTDEEVLTDACWALSYLSDGTNDKIQ+VIEAGV PRLVELL H
Sbjct: 238  PFEQVRPALSALQRLVHSTDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLVH 297

Query: 1039 QSPSVLIPALRSIGNIVTGDDLQTQCVISHGAXXXXXXXXTHNHKKSIKKEACWTISNIT 1218
             SPSVLIPALR++GNIVTGDDLQTQC+I HGA        THNHKKSIKKEACWTISNIT
Sbjct: 298  PSPSVLIPALRTVGNIVTGDDLQTQCIIEHGALPCLLSLLTHNHKKSIKKEACWTISNIT 357

Query: 1219 AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK 1398
            AGN++QIQAV  AGLI PLVNLLQ+AEFDIKKEAAWAISNATSGG+ +QIK++V Q  +K
Sbjct: 358  AGNKEQIQAVIAAGLISPLVNLLQSAEFDIKKEAAWAISNATSGGTHEQIKFLVSQNCIK 417

Query: 1399 PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ 1578
            PLCDLLVCPDPRI+TVCLEGLENILKVGEAEK   NTG +N+YAQL DDAEGLEKIENLQ
Sbjct: 418  PLCDLLVCPDPRIVTVCLEGLENILKVGEAEK--ANTGGINYYAQLTDDAEGLEKIENLQ 475

Query: 1579 SHDNSEIYEKAVKILETYWLEEEDETLPPGDPSAQGFQFGGGNDAAVPPGGFNF 1740
            SHDN+EIYEKAVKILETYWLEEEDETLP GD +   F F GGND  +P GGF F
Sbjct: 476  SHDNNEIYEKAVKILETYWLEEEDETLPAGDGTQNEFNF-GGNDIQLPSGGFKF 528
>ref|NP_187328.1| importin alpha; protein id: At3g06720.2, supported by cDNA: 9351.,
            supported by cDNA: gi_13699776, supported by cDNA:
            gi_15809793, supported by cDNA: gi_20453047, supported by
            cDNA: gi_3342555, supported by cDNA: gi_4191743
            [Arabidopsis thaliana]|gi|26454639|sp|Q96321|IMA1_ARATH
            Importin alpha-1 subunit (Karyopherin alpha-1 subunit)
            (KAP alpha)|gi|25314878|pir||T52268 importin alpha
            [validated] - Arabidopsis
            thaliana|gi|3342556|gb|AAC27644.1| importin alpha
            [Arabidopsis thaliana]|gi|7549641|gb|AAF63826.1| importin
            alpha [Arabidopsis thaliana]|gi|20453048|gb|AAM19769.1|
            AT3g06720/F3E22_14 [Arabidopsis
            thaliana]|gi|21618000|gb|AAM67050.1| importin alpha
            [Arabidopsis thaliana]|gi|21928021|gb|AAM78039.1|
            AT3g06720/F3E22_14 [Arabidopsis thaliana]
          Length = 532

 Score =  876 bits (2263), Expect = 0.0
 Identities = 452/537 (84%), Positives = 482/537 (89%), Gaps = 3/537 (0%)
 Frame = +1

Query: 139  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ 318
            MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESL KKRREG+QA Q   
Sbjct: 1    MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQ--- 57

Query: 319  FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG 498
              PS+  AS  V+KKL+SL  MV GVWSDD +LQLE+TTQFRKLLSIERSPPIEEVI AG
Sbjct: 58   GFPSASAAS--VDKKLDSLKDMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAG 115

Query: 499  VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR 678
            VVPRFVEFL +EDYP +QFEAAWALTNIASGTS++TKVVI+H AVPIFVQLLAS SDDVR
Sbjct: 116  VVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVR 175

Query: 679  EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP 858
            EQAVWALGNVAGDSPRCRDLVLG GAL+PLL+QLNEHAKLSMLRNATWTLSNFCRGKPQP
Sbjct: 176  EQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQP 235

Query: 859  PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQH 1038
             FDQV+PALPALERLIHS DEEVLTDACWALSYLSDGTNDKIQ+VI+AGVVP+LVELL H
Sbjct: 236  HFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGVVPKLVELLLH 295

Query: 1039 QSPSVLIPALRSIGNIVTGDDLQTQCVISHGAXXXXXXXXTHNHKKSIKKEACWTISNIT 1218
             SPSVLIPALR++GNIVTGDD+QTQCVI+ GA        T NHKKSIKKEACWTISNIT
Sbjct: 296  HSPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNIT 355

Query: 1219 AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK 1398
            AGN+DQIQ V EA LI PLV+LLQNAEFDIKKEAAWAISNATSGGS DQIKY+VEQG +K
Sbjct: 356  AGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIK 415

Query: 1399 PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ 1578
            PLCDLLVCPDPRIITVCLEGLENILKVGEAEK  G+TGD+N+YAQLIDDAEGLEKIENLQ
Sbjct: 416  PLCDLLVCPDPRIITVCLEGLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQ 475

Query: 1579 SHDNSEIYEKAVKILETYWLEEEDETL--PPG-DPSAQGFQFGGGNDAAVPPGGFNF 1740
            SHDN+EIYEKAVKILETYWLEEED+    PPG D S  GFQF GGN A VP GGFNF
Sbjct: 476  SHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQAGFQF-GGNQAPVPSGGFNF 531
>pir||T52102 probable nuclear transport factor importin alpha-like protein
            [imported] - Arabidopsis
            thaliana|gi|2959324|emb|CAA75513.1| Importin alpha-like
            protein [Arabidopsis thaliana]
          Length = 532

 Score =  875 bits (2260), Expect = 0.0
 Identities = 452/537 (84%), Positives = 481/537 (89%), Gaps = 3/537 (0%)
 Frame = +1

Query: 139  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQ 318
            MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESL KKRREG+QA Q   
Sbjct: 1    MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQ--- 57

Query: 319  FAPSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG 498
              PS+  AS  V+KKL+SL  MV GVWSDD +LQLE+TTQFRKLLSIERSPPIEEVI AG
Sbjct: 58   GFPSASAAS--VDKKLDSLKDMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAG 115

Query: 499  VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR 678
            VVPRFVEFL +EDYP +QFEAAWALTNIASGTS+ TKVVI+H AVPIFVQLLAS SDDVR
Sbjct: 116  VVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDYTKVVIDHNAVPIFVQLLASPSDDVR 175

Query: 679  EQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQP 858
            EQAVWALGNVAGDSPRCRDLVLG GAL+PLL+QLNEHAKLSMLRNATWTLSNFCRGKPQP
Sbjct: 176  EQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQP 235

Query: 859  PFDQVRPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQH 1038
             FDQV+PALPALERLIHS DEEVLTDACWALSYLSDGTNDKIQ+VI+AGVVP+LVELL H
Sbjct: 236  HFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGVVPKLVELLLH 295

Query: 1039 QSPSVLIPALRSIGNIVTGDDLQTQCVISHGAXXXXXXXXTHNHKKSIKKEACWTISNIT 1218
             SPSVLIPALR++GNIVTGDD+QTQCVI+ GA        T NHKKSIKKEACWTISNIT
Sbjct: 296  HSPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNIT 355

Query: 1219 AGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVK 1398
            AGN+DQIQ V EA LI PLV+LLQNAEFDIKKEAAWAISNATSGGS DQIKY+VEQG +K
Sbjct: 356  AGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIK 415

Query: 1399 PLCDLLVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQ 1578
            PLCDLLVCPDPRIITVCLEGLENILKVGEAEK  G+TGD+N+YAQLIDDAEGLEKIENLQ
Sbjct: 416  PLCDLLVCPDPRIITVCLEGLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQ 475

Query: 1579 SHDNSEIYEKAVKILETYWLEEEDETL--PPG-DPSAQGFQFGGGNDAAVPPGGFNF 1740
            SHDN+EIYEKAVKILETYWLEEED+    PPG D S  GFQF GGN A VP GGFNF
Sbjct: 476  SHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQAGFQF-GGNQAPVPSGGFNF 531
  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 130
effective length of database: 255,112,561
effective search space used: 148220397941
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)







BLAST Search Results