BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.1.cl.102.Contig1
(2659 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188084.1| cytochrome P450, putative; protein id: At3... 428 0.0
ref|NP_188079.1| cytochrome P450, putative; protein id: At3... 325 0.0
dbj|BAB19091.1| putative cytochrome P450 [Oryza sativa (jap... 195 e-127
ref|NP_188083.1| cytochrome P450, putative; protein id: At3... 388 e-124
ref|NP_188087.1| cytochrome P450, putative; protein id: At3... 385 e-123
>ref|NP_188084.1| cytochrome P450, putative; protein id: At3g14660.1, supported by
cDNA: gi_18086481 [Arabidopsis
thaliana]|gi|9294388|dbj|BAB02398.1| cytochrome P450
[Arabidopsis thaliana]|gi|18086482|gb|AAL57694.1|
AT3g14660/MIE1_16 [Arabidopsis
thaliana]|gi|27754241|gb|AAO22574.1| putative cytochrome
P450 protein [Arabidopsis thaliana]
Length = 512
Score = 428 bits (1100), Expect(3) = 0.0
Identities = 225/292 (77%), Positives = 225/292 (77%)
Frame = -1
Query: 2410 RTLQWVWLKPKMLESYLRRQGLAGTPYTPLVGDLKRNFSMLAEARSKPINLTDDITPRIV 2231
RTLQ VWLKPKMLESYLRRQGLAGTPYTPLVGDLKRNFSMLAEARSKPINLTDDITPRIV
Sbjct: 23 RTLQRVWLKPKMLESYLRRQGLAGTPYTPLVGDLKRNFSMLAEARSKPINLTDDITPRIV 82
Query: 2230 PYPLQMLKTHGMLPGWHLDSSLFRTIL*SI*KKFQLSYLYVVETGRTFFTWFGPIPTITI 2051
PYPLQMLKTHG RTFFTWFGPIPTITI
Sbjct: 83 PYPLQMLKTHG----------------------------------RTFFTWFGPIPTITI 108
Query: 2050 MDPEQIKEVFNKVYDFQKAHTFPLGRLIAAGLVSYDGDKWTKHRRIINPAFHLEKIKVYK 1871
MDPEQIKEVFNKVYDFQKAHTFPLGRLIAAGLVSYDGDKWTKHRRIINPAFHLEKIK
Sbjct: 109 MDPEQIKEVFNKVYDFQKAHTFPLGRLIAAGLVSYDGDKWTKHRRIINPAFHLEKIK--- 165
Query: 1870 LSFP*SQFSFMYVCPFGSEPICVLCFYVQNMVPAFHQSCSEIVGEWDKLVTDKQSSCEVD 1691
NMVPAFHQSCSEIVGEWDKLVTDKQSSCEVD
Sbjct: 166 -----------------------------NMVPAFHQSCSEIVGEWDKLVTDKQSSCEVD 196
Query: 1690 IWPWLVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKAIIPGYR 1535
IWPWLVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKAIIPGYR
Sbjct: 197 IWPWLVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKAIIPGYR 248
Score = 288 bits (737), Expect(3) = 0.0
Identities = 141/141 (100%), Positives = 141/141 (100%)
Frame = -3
Query: 950 MTMILYEVLRLYPPVVQLTRAIHKEMQLGDLTLPGGVQISLPILLIQRDRELWGNDAGEF 771
MTMILYEVLRLYPPVVQLTRAIHKEMQLGDLTLPGGVQISLPILLIQRDRELWGNDAGEF
Sbjct: 372 MTMILYEVLRLYPPVVQLTRAIHKEMQLGDLTLPGGVQISLPILLIQRDRELWGNDAGEF 431
Query: 770 KPDRFKDGLSKATKNQVSFFPFAWGPRICIGQNFALLEAKMAMTLILRKFSFELSPSYVH 591
KPDRFKDGLSKATKNQVSFFPFAWGPRICIGQNFALLEAKMAMTLILRKFSFELSPSYVH
Sbjct: 432 KPDRFKDGLSKATKNQVSFFPFAWGPRICIGQNFALLEAKMAMTLILRKFSFELSPSYVH 491
Query: 590 APYTVLTTHPQFGAPLILHKL 528
APYTVLTTHPQFGAPLILHKL
Sbjct: 492 APYTVLTTHPQFGAPLILHKL 512
Score = 219 bits (558), Expect(3) = 0.0
Identities = 111/132 (84%), Positives = 116/132 (87%)
Frame = -2
Query: 1419 SVVCSCSYFPTKGNRRMKAAAREIKFILRGIVNKRLRAREAGEAPSDDLLGILLESNLGQ 1240
+++ YFPTKGNRRMKAAAREIKFILRGIVNKRLRAREAGEAPSDDLLGILLESNLGQ
Sbjct: 242 AIIPGYRYFPTKGNRRMKAAAREIKFILRGIVNKRLRAREAGEAPSDDLLGILLESNLGQ 301
Query: 1239 TKGNGMSTEELMEECKLFYFAGQEXXXXXXXXXXXXLSQHQDWQARAREEVKQVFGDKEP 1060
TKGNGMSTEELMEECKLFYFAGQE LSQHQDWQARAREEVKQVFGDKEP
Sbjct: 302 TKGNGMSTEELMEECKLFYFAGQETTTVLLVWTMVLLSQHQDWQARAREEVKQVFGDKEP 361
Query: 1059 DAEGLNQLKVVS 1024
DAEGLNQLKV++
Sbjct: 362 DAEGLNQLKVMT 373
>ref|NP_188079.1| cytochrome P450, putative; protein id: At3g14610.1, supported by
cDNA: gi_18252154 [Arabidopsis
thaliana]|gi|9294383|dbj|BAB02393.1| cytochrome P450
[Arabidopsis thaliana]|gi|18252155|gb|AAL61910.1|
cytochrome P450 [Arabidopsis
thaliana]|gi|28059362|gb|AAO30051.1| cytochrome P450
[Arabidopsis thaliana]
Length = 512
Score = 325 bits (834), Expect(3) = 0.0
Identities = 166/292 (56%), Positives = 194/292 (65%)
Frame = -1
Query: 2410 RTLQWVWLKPKMLESYLRRQGLAGTPYTPLVGDLKRNFSMLAEARSKPINLTDDITPRIV 2231
R ++WVW+KPKMLES L+RQGL GTPYTPLVGD+KRN M+ EARSKPIN+TDDITPR++
Sbjct: 22 RIVKWVWIKPKMLESSLKRQGLTGTPYTPLVGDIKRNVDMMMEARSKPINVTDDITPRLL 81
Query: 2230 PYPLQMLKTHGMLPGWHLDSSLFRTIL*SI*KKFQLSYLYVVETGRTFFTWFGPIPTITI 2051
P L+ML +HG +TFF W GP+PTI I
Sbjct: 82 PLALKMLNSHG----------------------------------KTFFIWIGPLPTIVI 107
Query: 2050 MDPEQIKEVFNKVYDFQKAHTFPLGRLIAAGLVSYDGDKWTKHRRIINPAFHLEKIKVYK 1871
+PEQIKEVFNKV DF+KA TFPL RL+A GL SY GDKW HRRIINPAFHLEKIK
Sbjct: 108 TNPEQIKEVFNKVNDFEKASTFPLIRLLAGGLASYKGDKWASHRRIINPAFHLEKIK--- 164
Query: 1870 LSFP*SQFSFMYVCPFGSEPICVLCFYVQNMVPAFHQSCSEIVGEWDKLVTDKQSSCEVD 1691
NM+PAF+ CSE+V +W+KL TDK+S EVD
Sbjct: 165 -----------------------------NMIPAFYHCCSEVVCQWEKLFTDKESPLEVD 195
Query: 1690 IWPWLVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKAIIPGYR 1535
+WPWLV+MTADVIS TAFGSSYKEGQRIF+LQ ELA+LI QAF+K+ IPG R
Sbjct: 196 VWPWLVNMTADVISHTAFGSSYKEGQRIFQLQGELAELIAQAFKKSYIPGSR 247
Score = 237 bits (604), Expect(3) = 0.0
Identities = 112/141 (79%), Positives = 126/141 (88%)
Frame = -3
Query: 950 MTMILYEVLRLYPPVVQLTRAIHKEMQLGDLTLPGGVQISLPILLIQRDRELWGNDAGEF 771
MTMI EVLRLYPPV QL R ++KEM+LG+LTLP G+QI LP +L+QRD ELWG+DA +F
Sbjct: 372 MTMIFNEVLRLYPPVAQLKRVVNKEMKLGELTLPAGIQIYLPTILVQRDTELWGDDAADF 431
Query: 770 KPDRFKDGLSKATKNQVSFFPFAWGPRICIGQNFALLEAKMAMTLILRKFSFELSPSYVH 591
KP+RF+DGLSKATKNQVSFFPF WGPRICIGQNFA+LEAKMAM LIL+KFSFELSPSYVH
Sbjct: 432 KPERFRDGLSKATKNQVSFFPFGWGPRICIGQNFAMLEAKMAMALILQKFSFELSPSYVH 491
Query: 590 APYTVLTTHPQFGAPLILHKL 528
AP TV+TT PQFGA LILHKL
Sbjct: 492 APQTVMTTRPQFGAHLILHKL 512
Score = 155 bits (391), Expect(3) = 0.0
Identities = 80/133 (60%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Frame = -2
Query: 1419 SVVCSCSYFPTKGNRRMKAAAREIKFILRGIVNKRLRAREAGEAPSDDLLGILLESNLGQ 1240
S + ++PTK NRRMKA RE+ ILRGIV+KR +AREAGE +DDLLGILLESN +
Sbjct: 241 SYIPGSRFYPTKSNRRMKAIDREVDVILRGIVSKREKAREAGEPANDDLLGILLESNSEE 300
Query: 1239 TKGNGMSTEELMEECKLFYFAGQEXXXXXXXXXXXXLSQHQDWQARAREEVKQVFGD-KE 1063
++GNGMS E++M+ECKLFYFAGQE LS HQDWQARAREEV QV G+ +
Sbjct: 301 SQGNGMSVEDVMKECKLFYFAGQETTSVLLVWTMVLLSHHQDWQARAREEVMQVLGENNK 360
Query: 1062 PDAEGLNQLKVVS 1024
PD E LN LKV++
Sbjct: 361 PDMESLNNLKVMT 373
>dbj|BAB19091.1| putative cytochrome P450 [Oryza sativa (japonica
cultivar-group)]|gi|11761122|dbj|BAB19112.1| putative
cytochrome P450 [Oryza sativa (japonica cultivar-group)]
Length = 531
Score = 195 bits (495), Expect(3) = e-127
Identities = 121/296 (40%), Positives = 159/296 (52%), Gaps = 5/296 (1%)
Frame = -1
Query: 2410 RTLQWVWLKPKMLESYLRRQGLAGTPYTPLVGDLKRNFSMLAEAR--SKPINL-TDDITP 2240
R L +W +P+ LE LR QGL GT Y L+GDL R F L E S P+ L DI P
Sbjct: 34 RLLDRLWWRPRRLERALRAQGLRGTAYRFLLGDL-REFGRLNEEAWSSAPLPLGCHDIVP 92
Query: 2239 RIVPYPLQMLKTHGMLPGWHLDSSLFRTIL*SI*KKFQLSYLYVVETGRTFFTWFGPIPT 2060
R+ P+ + ++ +G F+WFGPIP+
Sbjct: 93 RVTPFVHRNVRDNGR---------------------------------PCCFSWFGPIPS 119
Query: 2059 ITIMDPEQIKEVF-NKVYDFQKAHTFPLGRLIAAGLVSYDGDKWTKHRRIINPAFHLEKI 1883
+TI DP Q+++V NK+ F+K L +L+A GL S+DG+KW KHRRI+NPAFHLEK+
Sbjct: 120 VTITDPAQVRDVLSNKLGHFEKPKLPALTKLLADGLTSHDGEKWVKHRRIMNPAFHLEKL 179
Query: 1882 KVYKLSFP*SQFSFMYVCPFGSEPICVLCFYVQNMVPAFHQSCSEIVGEW-DKLVTDKQS 1706
K+ M+PAF C E+VG+W D L D
Sbjct: 180 KL--------------------------------MLPAFSTCCEELVGKWMDSLGPD--G 205
Query: 1705 SCEVDIWPWLVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKAIIPGY 1538
SCE+D+WP + S+T DVISRTAFGSSY EG+RIF+LQ E A+L I A +K +IPGY
Sbjct: 206 SCELDVWPEMQSLTGDVISRTAFGSSYSEGRRIFQLQTEQAELFIGAIQKFVIPGY 261
Score = 181 bits (458), Expect(3) = e-127
Identities = 78/141 (55%), Positives = 108/141 (76%)
Frame = -3
Query: 950 MTMILYEVLRLYPPVVQLTRAIHKEMQLGDLTLPGGVQISLPILLIQRDRELWGNDAGEF 771
+TM+LYEVLRLYPP + +R +KEM++G + P GV + LP+L I DRE+WG D EF
Sbjct: 391 VTMVLYEVLRLYPPAIVFSRKTYKEMEIGGVVYPRGVILELPVLFIHHDREIWGRDVHEF 450
Query: 770 KPDRFKDGLSKATKNQVSFFPFAWGPRICIGQNFALLEAKMAMTLILRKFSFELSPSYVH 591
+P+RF +G+S+A+ ++ +F PF WGPR+CIGQNFALLEAKMA+ +IL++F FEL+ SY H
Sbjct: 451 RPERFAEGISRASNDRGAFLPFGWGPRVCIGQNFALLEAKMALCMILQRFEFELAASYTH 510
Query: 590 APYTVLTTHPQFGAPLILHKL 528
AP+TV+T HP GA + L +
Sbjct: 511 APHTVMTLHPMHGAQMKLRMI 531
Score = 125 bits (315), Expect(3) = e-127
Identities = 66/136 (48%), Positives = 88/136 (64%), Gaps = 5/136 (3%)
Frame = -2
Query: 1416 VVCSCSYFPTKGNRRMKAAAREIKFILRGIVNKRLRAREAGEAPSDDLLGILLESNLGQT 1237
V+ Y PTK NRRM+ E++ ILRGI+ KR++A GE+ +DDLLG+LLESN+
Sbjct: 257 VIPGYMYLPTKKNRRMRRINSEVESILRGIIGKRMQAIAEGESTNDDLLGLLLESNMRHA 316
Query: 1236 KGNG-----MSTEELMEECKLFYFAGQEXXXXXXXXXXXXLSQHQDWQARAREEVKQVFG 1072
NG M+TE+++EECKLFYFAG E LS H +WQ RAREEV +FG
Sbjct: 317 DENGRSSPGMTTEDVIEECKLFYFAGMETTSVLLTWTMVVLSMHPEWQDRAREEVLGLFG 376
Query: 1071 DKEPDAEGLNQLKVVS 1024
+P+ EGL++LK V+
Sbjct: 377 RDKPEYEGLSRLKTVT 392
>ref|NP_188083.1| cytochrome P450, putative; protein id: At3g14650.1 [Arabidopsis
thaliana]|gi|9294387|dbj|BAB02397.1| cytochrome P450
[Arabidopsis thaliana]
Length = 512
Score = 388 bits (996), Expect = e-106
Identities = 204/291 (70%), Positives = 211/291 (72%)
Frame = -1
Query: 2410 RTLQWVWLKPKMLESYLRRQGLAGTPYTPLVGDLKRNFSMLAEARSKPINLTDDITPRIV 2231
RTLQWVW KPKMLESYLRRQGLAGTPYTPLVGDLK+NFSM AEARSKPINLTDDITPRIV
Sbjct: 23 RTLQWVWFKPKMLESYLRRQGLAGTPYTPLVGDLKKNFSMRAEARSKPINLTDDITPRIV 82
Query: 2230 PYPLQMLKTHGMLPGWHLDSSLFRTIL*SI*KKFQLSYLYVVETGRTFFTWFGPIPTITI 2051
PYPLQMLKTHG RTFFTWFG IPTITI
Sbjct: 83 PYPLQMLKTHG----------------------------------RTFFTWFGAIPTITI 108
Query: 2050 MDPEQIKEVFNKVYDFQKAHTFPLGRLIAAGLVSYDGDKWTKHRRIINPAFHLEKIKVYK 1871
MDPEQI EV NKVYDFQKAHTFPLGRLIA G++SYDGDKW KHRRIINPAFHLEKIK
Sbjct: 109 MDPEQITEVLNKVYDFQKAHTFPLGRLIATGVLSYDGDKWAKHRRIINPAFHLEKIK--- 165
Query: 1870 LSFP*SQFSFMYVCPFGSEPICVLCFYVQNMVPAFHQSCSEIVGEWDKLVTDKQSSCEVD 1691
NMVPAFHQSCSEIV +WDKLV+DK+SSCEVD
Sbjct: 166 -----------------------------NMVPAFHQSCSEIVCKWDKLVSDKESSCEVD 196
Query: 1690 IWPWLVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKAIIPGY 1538
+WP LVSMTADVISRTAFGSS EGQRIFELQAELAQLIIQ RKA IPGY
Sbjct: 197 VWPGLVSMTADVISRTAFGSSCVEGQRIFELQAELAQLIIQTVRKAFIPGY 247
Score = 262 bits (670), Expect(2) = e-124
Identities = 125/141 (88%), Positives = 133/141 (93%)
Frame = -3
Query: 950 MTMILYEVLRLYPPVVQLTRAIHKEMQLGDLTLPGGVQISLPILLIQRDRELWGNDAGEF 771
MTMILYEVLRLYPP+ QL+RAIHKEM+LGDLTLPGGV I+LPILL+QRD ELWGNDAGEF
Sbjct: 372 MTMILYEVLRLYPPIPQLSRAIHKEMELGDLTLPGGVLINLPILLVQRDTELWGNDAGEF 431
Query: 770 KPDRFKDGLSKATKNQVSFFPFAWGPRICIGQNFALLEAKMAMTLILRKFSFELSPSYVH 591
KPDRFKDGLSKATKNQ SFFPFAWG RICIGQNFALLEAKMAM LIL++FSFELSPSYVH
Sbjct: 432 KPDRFKDGLSKATKNQASFFPFAWGSRICIGQNFALLEAKMAMALILQRFSFELSPSYVH 491
Query: 590 APYTVLTTHPQFGAPLILHKL 528
APYTV T HPQFGAPLI+HKL
Sbjct: 492 APYTVFTIHPQFGAPLIMHKL 512
Score = 208 bits (529), Expect(2) = e-124
Identities = 105/126 (83%), Positives = 110/126 (86%)
Frame = -2
Query: 1401 SYFPTKGNRRMKAAAREIKFILRGIVNKRLRAREAGEAPSDDLLGILLESNLGQTKGNGM 1222
SY PTKGNRRMKA AREI+ ILRGIVNKRLRAREAGEAP+DDLLGILLESNLGQTKGNGM
Sbjct: 248 SYLPTKGNRRMKAKAREIQVILRGIVNKRLRAREAGEAPNDDLLGILLESNLGQTKGNGM 307
Query: 1221 STEELMEECKLFYFAGQEXXXXXXXXXXXXLSQHQDWQARAREEVKQVFGDKEPDAEGLN 1042
STE+LMEECKLFYF GQE LSQHQDWQARAREEVKQVFGDKEPDAEGLN
Sbjct: 308 STEDLMEECKLFYFVGQETTSVLLVWTMVLLSQHQDWQARAREEVKQVFGDKEPDAEGLN 367
Query: 1041 QLKVVS 1024
QLKV++
Sbjct: 368 QLKVMT 373
>ref|NP_188087.1| cytochrome P450, putative; protein id: At3g14690.1, supported by
cDNA: gi_15292786, supported by cDNA: gi_20465786
[Arabidopsis thaliana]|gi|9294391|dbj|BAB02401.1|
cytochrome P450 [Arabidopsis
thaliana]|gi|15292787|gb|AAK92762.1| putative cytochrome
P450 protein [Arabidopsis
thaliana]|gi|20465787|gb|AAM20382.1| putative cytochrome
P450 protein [Arabidopsis thaliana]
Length = 512
Score = 385 bits (988), Expect = e-105
Identities = 196/291 (67%), Positives = 211/291 (72%)
Frame = -1
Query: 2410 RTLQWVWLKPKMLESYLRRQGLAGTPYTPLVGDLKRNFSMLAEARSKPINLTDDITPRIV 2231
RTLQWVW KPKMLE YLRRQGLAGTPYTPLVGDLK+NF+ML+EARSKP+ LTDDI+PR+V
Sbjct: 23 RTLQWVWFKPKMLEHYLRRQGLAGTPYTPLVGDLKKNFTMLSEARSKPLKLTDDISPRVV 82
Query: 2230 PYPLQMLKTHGMLPGWHLDSSLFRTIL*SI*KKFQLSYLYVVETGRTFFTWFGPIPTITI 2051
PYPLQM KT+G RT+FTWFGPIPTITI
Sbjct: 83 PYPLQMFKTYG----------------------------------RTYFTWFGPIPTITI 108
Query: 2050 MDPEQIKEVFNKVYDFQKAHTFPLGRLIAAGLVSYDGDKWTKHRRIINPAFHLEKIKVYK 1871
MDPEQIKEVFNKVYDFQK HTFPL +IA GL +YDGDKW KHRRIINPAFH+EKIK
Sbjct: 109 MDPEQIKEVFNKVYDFQKPHTFPLATIIAKGLANYDGDKWAKHRRIINPAFHIEKIK--- 165
Query: 1870 LSFP*SQFSFMYVCPFGSEPICVLCFYVQNMVPAFHQSCSEIVGEWDKLVTDKQSSCEVD 1691
NMVPAFHQSC E+VGEWD+LV+DK SSCEVD
Sbjct: 166 -----------------------------NMVPAFHQSCREVVGEWDQLVSDKGSSCEVD 196
Query: 1690 IWPWLVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKAIIPGY 1538
+WP LVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKA IPGY
Sbjct: 197 VWPGLVSMTADVISRTAFGSSYKEGQRIFELQAELAQLIIQAFRKAFIPGY 247
Score = 261 bits (668), Expect(2) = e-123
Identities = 125/141 (88%), Positives = 133/141 (93%)
Frame = -3
Query: 950 MTMILYEVLRLYPPVVQLTRAIHKEMQLGDLTLPGGVQISLPILLIQRDRELWGNDAGEF 771
MTMILYEVLRLYPPV QLTRAIHKE++LGDLTLPGGVQISLPILL+Q D ELWGNDA EF
Sbjct: 372 MTMILYEVLRLYPPVTQLTRAIHKELKLGDLTLPGGVQISLPILLVQHDIELWGNDAAEF 431
Query: 770 KPDRFKDGLSKATKNQVSFFPFAWGPRICIGQNFALLEAKMAMTLILRKFSFELSPSYVH 591
PDRFKDGLSKATK+QVSFFPFAWGPRICIGQNFALLEAKMAM LILR+FSFE+SPSYVH
Sbjct: 432 NPDRFKDGLSKATKSQVSFFPFAWGPRICIGQNFALLEAKMAMALILRRFSFEISPSYVH 491
Query: 590 APYTVLTTHPQFGAPLILHKL 528
APYTV+T HPQFGA LI+HKL
Sbjct: 492 APYTVITIHPQFGAQLIMHKL 512
Score = 206 bits (523), Expect(2) = e-123
Identities = 105/126 (83%), Positives = 110/126 (86%)
Frame = -2
Query: 1401 SYFPTKGNRRMKAAAREIKFILRGIVNKRLRAREAGEAPSDDLLGILLESNLGQTKGNGM 1222
SY PTK NRRMKAAAREI+ ILRGIVNKRLRAREAGEAPSDDLLGILLESNL QT+GNGM
Sbjct: 248 SYLPTKSNRRMKAAAREIQVILRGIVNKRLRAREAGEAPSDDLLGILLESNLRQTEGNGM 307
Query: 1221 STEELMEECKLFYFAGQEXXXXXXXXXXXXLSQHQDWQARAREEVKQVFGDKEPDAEGLN 1042
STE+LMEECKLFYFAGQE LSQHQDWQARAREEVKQVFGDKEPDAEGLN
Sbjct: 308 STEDLMEECKLFYFAGQETTSVLLVWTMVLLSQHQDWQARAREEVKQVFGDKEPDAEGLN 367
Query: 1041 QLKVVS 1024
QLKV++
Sbjct: 368 QLKVMT 373
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 132
effective length of database: 252,434,469
effective search space used: 190083155157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)