BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.0.cl.092.Contig1
(2279 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_671901.1| Expressed protein; protein id: At2g30575.1... 1162 0.0
ref|NP_563771.1| expressed protein; protein id: At1g06780.1... 768 0.0
dbj|BAC22319.1| contains EST AU065171(E60238)~hypothetical ... 421 e-116
dbj|BAB11325.1| emb|CAB71043.1~gene_id:MCA23.10~strong simi... 420 e-116
ref|NP_568688.1| putative protein; protein id: At5g47780.1,... 420 e-116
>ref|NP_671901.1| Expressed protein; protein id: At2g30575.1, supported by cDNA:
gi_19698932 [Arabidopsis
thaliana]|gi|19698933|gb|AAL91202.1| unknown protein
[Arabidopsis thaliana]|gi|27311915|gb|AAO00923.1| unknown
protein [Arabidopsis thaliana]
Length = 610
Score = 1162 bits (3006), Expect = 0.0
Identities = 576/610 (94%), Positives = 576/610 (94%)
Frame = +1
Query: 280 MNQVRRWQRXXXXXXXXXXXXAPIVFVSNRLKSITSVDRGEFIEELSDITDKTEDELRLT 459
MNQVRRWQR APIVFVSNRLKSITSVDRGEFIEELSDITDKTEDELRLT
Sbjct: 1 MNQVRRWQRILILSLLLLSVLAPIVFVSNRLKSITSVDRGEFIEELSDITDKTEDELRLT 60
Query: 460 AIEQDEEGLKEPKRILQDRDFNSVVLSNSSDKSNDTVQSNEGDQKNFLSEVDKGNNHKPK 639
AIEQDEEGLKEPKRILQDRDFNSVVLSNSSDKSNDTVQSNEGDQKNFLSEVDKGNNHKPK
Sbjct: 61 AIEQDEEGLKEPKRILQDRDFNSVVLSNSSDKSNDTVQSNEGDQKNFLSEVDKGNNHKPK 120
Query: 640 EEQAVSQKTTVSSNAEVKISARDIQLNHKTEFRPPSSKSEKNTRVQLERATDERVKEIRD 819
EEQAVSQKTTVSSNAEVKISARDIQLNHKTEFRPPSSKSEKNTRVQLERATDERVKEIRD
Sbjct: 121 EEQAVSQKTTVSSNAEVKISARDIQLNHKTEFRPPSSKSEKNTRVQLERATDERVKEIRD 180
Query: 820 KIIQAKAYLNLALPGNNSQIVKELRVRTKELERATGDTTKDKYLPKSSPNRLKAMEVALY 999
KIIQAKAYLNLALPGNNSQIVKELRVRTKELERATGDTTKDKYLPKSSPNRLKAMEVALY
Sbjct: 181 KIIQAKAYLNLALPGNNSQIVKELRVRTKELERATGDTTKDKYLPKSSPNRLKAMEVALY 240
Query: 1000 KVSRAFHNCPAIATKLQAMTYKTEEXXXXXXXXXXYLMQLAARTTPKGLHCLSMRLTTEY 1179
KVSRAFHNCPAIATKLQAMTYKTEE YLMQLAARTTPKGLHCLSMRLTTEY
Sbjct: 241 KVSRAFHNCPAIATKLQAMTYKTEEQARAQKKQAAYLMQLAARTTPKGLHCLSMRLTTEY 300
Query: 1180 FTLDHEKRQLLQQSYNDPDLYHYVVFSDNVLAXXXXXXXXXXXXKEPDKIVFHVVTDSLN 1359
FTLDHEKRQLLQQSYNDPDLYHYVVFSDNVLA KEPDKIVFHVVTDSLN
Sbjct: 301 FTLDHEKRQLLQQSYNDPDLYHYVVFSDNVLASSVVVNSTISSSKEPDKIVFHVVTDSLN 360
Query: 1360 YPAISMWFLLNPSGRASIQILNIDEMNVLPLYHAELLMKQNSSDPRIISALNHARFYLPD 1539
YPAISMWFLLNPSGRASIQILNIDEMNVLPLYHAELLMKQNSSDPRIISALNHARFYLPD
Sbjct: 361 YPAISMWFLLNPSGRASIQILNIDEMNVLPLYHAELLMKQNSSDPRIISALNHARFYLPD 420
Query: 1540 IFPGLNKIVLFDHDVVVQRDLTRLWSLDMTGKVVGAVETCLEGDPSYRSMDSFINFSDAW 1719
IFPGLNKIVLFDHDVVVQRDLTRLWSLDMTGKVVGAVETCLEGDPSYRSMDSFINFSDAW
Sbjct: 421 IFPGLNKIVLFDHDVVVQRDLTRLWSLDMTGKVVGAVETCLEGDPSYRSMDSFINFSDAW 480
Query: 1720 VSQKFDPKACTWAFGMNLFDLEEWRRQELTSVYLKYFDLGVKGHLWKAGGLPVGWLTFFG 1899
VSQKFDPKACTWAFGMNLFDLEEWRRQELTSVYLKYFDLGVKGHLWKAGGLPVGWLTFFG
Sbjct: 481 VSQKFDPKACTWAFGMNLFDLEEWRRQELTSVYLKYFDLGVKGHLWKAGGLPVGWLTFFG 540
Query: 1900 QTFPLEKRWNVGGLGHESGLRASDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNIHVPYHH 2079
QTFPLEKRWNVGGLGHESGLRASDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNIHVPYHH
Sbjct: 541 QTFPLEKRWNVGGLGHESGLRASDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNIHVPYHH 600
Query: 2080 PHLQRCNIHD 2109
PHLQRCNIHD
Sbjct: 601 PHLQRCNIHD 610
>ref|NP_563771.1| expressed protein; protein id: At1g06780.1, supported by cDNA:
gi_15028086, supported by cDNA: gi_20259310 [Arabidopsis
thaliana]|gi|25406938|pir||F86202 hypothetical protein
[imported] - Arabidopsis
thaliana|gi|7523701|gb|AAF63140.1|AC011001_10 Unknown
protein [Arabidopsis thaliana]|gi|15028087|gb|AAK76574.1|
unknown protein [Arabidopsis
thaliana]|gi|20259311|gb|AAM14391.1| unknown protein
[Arabidopsis thaliana]
Length = 589
Score = 768 bits (1984), Expect = 0.0
Identities = 398/612 (65%), Positives = 461/612 (75%), Gaps = 4/612 (0%)
Frame = +1
Query: 280 MNQVRRWQRXXXXXXXXXXXXAPIVFVSNRLKSITSVDRGEFIEELSDITDKTEDELRLT 459
M Q+RRWQR AP++FVSNRLKSIT V R EFIEELS I T D LRL+
Sbjct: 1 MKQIRRWQRILILALLSISVFAPLIFVSNRLKSITPVGRREFIEELSKIRFTTND-LRLS 59
Query: 460 AIE-QDEEGLKEPKRIL-QDRDFNSVVLSNSSDKSNDTVQSNEGDQKNFLSEVDKGNNHK 633
AIE +D EGLK P+ IL +D +FNS +E D GN +K
Sbjct: 60 AIEHEDGEGLKGPRLILFKDGEFNSS------------------------AESDGGNTYK 95
Query: 634 PKEEQA-VSQKTTVSSNAEVKISARDIQLNHKTEFRPPSSKSEKNTRVQLERATDERVKE 810
+EEQ VSQK TVSS+ + +I QL +KT+F+PP SK EKNTRVQ +RATD + KE
Sbjct: 96 NREEQVIVSQKMTVSSDEKGQILPTVNQLANKTDFKPPLSKGEKNTRVQPDRATDVKTKE 155
Query: 811 IRDKIIQAKAYLNLALPGNNSQIVKELRVRTKELERATGDTTKDKYLPKSSPNRLKAMEV 990
IRDKIIQAKAYLN A PG+NSQ+VKELR R KELER+ GD TKDK L K + R+K ME
Sbjct: 156 IRDKIIQAKAYLNFAPPGSNSQVVKELRGRLKELERSVGDATKDKDLSKGALRRVKPMEN 215
Query: 991 ALYKVSRAFHNCPAIATKLQAMTYKTEEXXXXXXXXXXYLMQLAARTTPKGLHCLSMRLT 1170
LYK SR F+NCPAIATKL+AM Y TEE YLMQLAARTTPKGLHCLSMRLT
Sbjct: 216 VLYKASRVFNNCPAIATKLRAMNYNTEEQVQAQKNQAAYLMQLAARTTPKGLHCLSMRLT 275
Query: 1171 TEYFTLDHEKRQLL-QQSYNDPDLYHYVVFSDNVLAXXXXXXXXXXXXKEPDKIVFHVVT 1347
+EYF+LD EKRQ+ QQ+Y D + HYVVFSDNVLA KEP++IVFHVVT
Sbjct: 276 SEYFSLDPEKRQMPNQQNYFDANFNHYVVFSDNVLASSVVVNSTISSSKEPERIVFHVVT 335
Query: 1348 DSLNYPAISMWFLLNPSGRASIQILNIDEMNVLPLYHAELLMKQNSSDPRIISALNHARF 1527
DSLNYPAISMWFLLN +A+IQILNID+M+VLP + +LLMKQNS+DPR IS LNHARF
Sbjct: 336 DSLNYPAISMWFLLNIQSKATIQILNIDDMDVLPRDYDQLLMKQNSNDPRFISTLNHARF 395
Query: 1528 YLPDIFPGLNKIVLFDHDVVVQRDLTRLWSLDMTGKVVGAVETCLEGDPSYRSMDSFINF 1707
YLPDIFPGLNK+VL DHDVVVQRDL+RLWS+DM GKVVGAVETCLEG+ S+RSM +FINF
Sbjct: 396 YLPDIFPGLNKMVLLDHDVVVQRDLSRLWSIDMKGKVVGAVETCLEGESSFRSMSTFINF 455
Query: 1708 SDAWVSQKFDPKACTWAFGMNLFDLEEWRRQELTSVYLKYFDLGVKGHLWKAGGLPVGWL 1887
SD WV+ KF P+ACTWAFGMNL DLEEWR ++LTS Y+KYF+LG K LWKAG LP+GWL
Sbjct: 456 SDTWVAGKFSPRACTWAFGMNLIDLEEWRIRKLTSTYIKYFNLGTKRPLWKAGSLPIGWL 515
Query: 1888 TFFGQTFPLEKRWNVGGLGHESGLRASDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNIHV 2067
TF+ QT L+KRW+V GLG ESG++A DIEQAAVIHYDG+MKPWLDIG + YKRYWNIHV
Sbjct: 516 TFYRQTLALDKRWHVMGLGRESGVKAVDIEQAAVIHYDGVMKPWLDIGKENYKRYWNIHV 575
Query: 2068 PYHHPHLQRCNI 2103
PYHH +LQ+CN+
Sbjct: 576 PYHHTYLQQCNL 587
>dbj|BAC22319.1| contains EST AU065171(E60238)~hypothetical protein~similar to
Arabidopsis thaliana chromosome 5,MCA23.10 [Oryza sativa
(japonica cultivar-group)]
Length = 649
Score = 421 bits (1081), Expect = e-116
Identities = 235/654 (35%), Positives = 351/654 (52%), Gaps = 48/654 (7%)
Frame = +1
Query: 289 VRRWQRXXXXXXXXXXXXAPIVFVSNRLKSITSVDR-----GEFIEELSDITDKTEDELR 453
VRR +R +P+V + RL + + ++ GE + + + + L
Sbjct: 2 VRRRRRSVLLLLLALTVLSPLVLYTRRLSAALNPNQRRDLPGEIVNQGRGVKASKLNALP 61
Query: 454 LTAIEQDEEGLKEPKRILQDRDFNSVVLSNSSDKSNDTVQSNEGDQKN-FLSEVDKGNNH 630
L + LKEP I+ + ++ S + + G+ KN LSE ++
Sbjct: 62 LETVGS----LKEPVGIVFSEESRESASKSTEPDSQEFLLRKAGEHKNRVLSEATAADSA 117
Query: 631 KPKEEQAVSQKTTVSSNAE--VKISARDIQLNHKTEFR---------PPSSKSEKNTRVQ 777
+ +++ + Q T+ + +S Q+ ++ R P SS +
Sbjct: 118 RSEDDDLIEQVTSKDGEDDGLATVSVDQQQITTASQQRSASEPFLNFPASSLENVPEQTS 177
Query: 778 LERAT---------DERVKEIRDKIIQAKAYLNLALPGNNSQIVKELRVRTKELERATGD 930
+E + D R++ IRD +I+AK YL L N Q +K+LR R +E+++ GD
Sbjct: 178 MENSLEGNKDGALLDTRIRNIRDLLIKAKVYLGLGAIRANPQYLKDLRQRIREVQKVLGD 237
Query: 931 TTKDKYLPKSSPNRLKAMEVALYKVSRAFHNCPAIATKLQAMTYKTEEXXXXXXXXXXYL 1110
+KD LPK++ ++K +E L K +C + KL+AM + EE +L
Sbjct: 238 ASKDSDLPKNANEKVKTLEQTLIKGKLMQDDCSVVVKKLRAMLHSAEEQLHAHKKQTVFL 297
Query: 1111 MQLAARTTPKGLHCLSMRLTTEYFTLDHEKRQLL-QQSYNDPDLYHYVVFSDNVLAXXXX 1287
QLAA+T PKGLHCL +RL EYF LD +Q ++ +DP LYHY +FSDN+LA
Sbjct: 298 TQLAAKTLPKGLHCLPLRLANEYFLLDPSHQQFPNKEKLDDPKLYHYALFSDNILAAAVV 357
Query: 1288 XXXXXXXXKEPDKIVFHVVTDSLNYPAISMWFLLNPSGRASIQILNIDEMNVLPLYHAEL 1467
K P VFH+VTD LNY + MWFL NP G+A+I++ NI+E L ++ +
Sbjct: 358 VNSTVLNAKHPSHHVFHIVTDRLNYAPMRMWFLSNPPGKATIEVRNIEEFTWLNASYSPV 417
Query: 1468 LMKQNSS---------------------DPRIISALNHARFYLPDIFPGLNKIVLFDHDV 1584
L + S +P+ +S LNH RFYLP+I+P L+KIV D DV
Sbjct: 418 LKQLESQSMIDYYFRTHRANSDSNLKYRNPKYLSILNHLRFYLPEIYPNLHKIVFLDDDV 477
Query: 1585 VVQRDLTRLWSLDMTGKVVGAVETCLEGDPSYRSMDSFINFSDAWVSQKFDPKACTWAFG 1764
V+++DLT LWS+DM GKV+G VETC E S+ D ++NFS+ + + FDP AC WAFG
Sbjct: 478 VIKKDLTSLWSIDMKGKVIGVVETCGE---SFHRFDRYLNFSNPVIVKNFDPHACGWAFG 534
Query: 1765 MNLFDLEEWRRQELTSVYLKYFDLGVKGHLWKAGGLPVGWLTFFGQTFPLEKRWNVGGLG 1944
MN+FDL EWRRQ +T +Y + L LWK G LP G +TF+ +T PL + W+V GLG
Sbjct: 535 MNVFDLAEWRRQNITEIYHSWQKLNQDRLLWKLGTLPPGLITFWNKTLPLNRSWHVLGLG 594
Query: 1945 HESGLRASDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNIHVPYHHPHLQRCNIH 2106
+ + + DIE+AAVIHY+G MKPWL+IG+ K++ YW+ ++ Y P L+ CNI+
Sbjct: 595 YNPHVSSRDIERAAVIHYNGNMKPWLEIGLPKFRNYWSAYLDYDQPFLRECNIN 648
>dbj|BAB11325.1| emb|CAB71043.1~gene_id:MCA23.10~strong similarity to unknown protein
[Arabidopsis thaliana]
Length = 615
Score = 420 bits (1080), Expect = e-116
Identities = 227/603 (37%), Positives = 351/603 (57%), Gaps = 28/603 (4%)
Frame = +1
Query: 382 TSVDRGEFIEELSDITDKTEDELRLTAIEQDEEGLKEPKRILQDRDFNSVVLSNSSDKSN 561
T + +F+E+++ +T + DE RL + ++ + + V S+ + +
Sbjct: 32 TPFSKRDFLEDVTALTFNS-DENRLNLLPRESPAVLRGGLV-------GAVYSDKNSRRL 83
Query: 562 DTVQSNEGDQKNFLSEVDKGNNHKPKEEQAVSQKTTVSSNAEVKISARDIQLNHKTEFR- 738
D + + LS D + H + +S++ + +QL +T +
Sbjct: 84 DQLSAR------VLSATDD-DTHSHTDISIKQVTHDAASDSHINRENMHVQLTQQTSEKV 136
Query: 739 -----PPSSKSEKNTRVQLERATDERVKEIRDKIIQAKAYLNLALPGNNSQIVKELRVRT 903
P + ++K+T L D +V+ ++D++I+AK YL+L N+ V+ELR+R
Sbjct: 137 DEQPEPNAFGAKKDTGNVL--MPDAQVRHLKDQLIRAKVYLSLPSAKANAHFVRELRLRI 194
Query: 904 KELERATGDTTKDKYLPKSSPNRLKAMEVALYKVSRAFHNCPAIATKLQAMTYKTEEXXX 1083
KE++RA D +KD LPK++ +LKAME L K + +C + KL+AM + +E
Sbjct: 195 KEVQRALADASKDSDLPKTAIEKLKAMEQTLAKGKQIQDDCSTVVKKLRAMLHSADEQLR 254
Query: 1084 XXXXXXXYLMQLAARTTPKGLHCLSMRLTTEYFTLDHEKRQLL-QQSYNDPDLYHYVVFS 1260
+L QL A+T PKGLHCL +RLTT+Y+ L+ ++Q Q+ D LYHY +FS
Sbjct: 255 VHKKQTMFLTQLTAKTIPKGLHCLPLRLTTDYYALNSSEQQFPNQEKLEDTQLYHYALFS 314
Query: 1261 DNVLAXXXXXXXXXXXXKEPDKIVFHVVTDSLNYPAISMWFLLNPSGRASIQILNIDEMN 1440
DNVLA K P K VFH+VTD LNY A+ MWFL NP G+A+IQ+ N++E
Sbjct: 315 DNVLATSVVVNSTITNAKHPLKHVFHIVTDRLNYAAMRMWFLDNPPGKATIQVQNVEEFT 374
Query: 1441 VLPLYHAELLMKQNSS---------------------DPRIISALNHARFYLPDIFPGLN 1557
L ++ +L + +S +P+ +S LNH RFYLP+IFP L+
Sbjct: 375 WLNSSYSPVLKQLSSRSMIDYYFRAHHTNSDTNLKFRNPKYLSILNHLRFYLPEIFPKLS 434
Query: 1558 KIVLFDHDVVVQRDLTRLWSLDMTGKVVGAVETCLEGDPSYRSMDSFINFSDAWVSQKFD 1737
K++ D D+VVQ+DL+ LWS+D+ G V GAVETC E S+ D ++NFS+ +S+ FD
Sbjct: 435 KVLFLDDDIVVQKDLSGLWSVDLKGNVNGAVETCGE---SFHRFDRYLNFSNPLISKNFD 491
Query: 1738 PKACTWAFGMNLFDLEEWRRQELTSVYLKYFDLGVKGHLWKAGGLPVGWLTFFGQTFPLE 1917
P+AC WA+GMN+FDL+EW+RQ +T VY ++ DL LWK G LP G +TF+ +T+PL+
Sbjct: 492 PRACGWAYGMNVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLD 551
Query: 1918 KRWNVGGLGHESGLRASDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNIHVPYHHPHLQRC 2097
++W++ GLG+ + DIE+AAVIHY+G +KPWL+IGI +Y+ +W+ HV Y H +L+ C
Sbjct: 552 RKWHILGLGYNPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLREC 611
Query: 2098 NIH 2106
NI+
Sbjct: 612 NIN 614
>ref|NP_568688.1| putative protein; protein id: At5g47780.1, supported by cDNA:
gi_15810326, supported by cDNA: gi_20259234 [Arabidopsis
thaliana]|gi|15810327|gb|AAL07051.1| unknown protein
[Arabidopsis thaliana]|gi|20259235|gb|AAM14333.1| unknown
protein [Arabidopsis thaliana]
Length = 616
Score = 420 bits (1080), Expect = e-116
Identities = 227/603 (37%), Positives = 351/603 (57%), Gaps = 28/603 (4%)
Frame = +1
Query: 382 TSVDRGEFIEELSDITDKTEDELRLTAIEQDEEGLKEPKRILQDRDFNSVVLSNSSDKSN 561
T + +F+E+++ +T + DE RL + ++ + + V S+ + +
Sbjct: 33 TPFSKRDFLEDVTALTFNS-DENRLNLLPRESPAVLRGGLV-------GAVYSDKNSRRL 84
Query: 562 DTVQSNEGDQKNFLSEVDKGNNHKPKEEQAVSQKTTVSSNAEVKISARDIQLNHKTEFR- 738
D + + LS D + H + +S++ + +QL +T +
Sbjct: 85 DQLSAR------VLSATDD-DTHSHTDISIKQVTHDAASDSHINRENMHVQLTQQTSEKV 137
Query: 739 -----PPSSKSEKNTRVQLERATDERVKEIRDKIIQAKAYLNLALPGNNSQIVKELRVRT 903
P + ++K+T L D +V+ ++D++I+AK YL+L N+ V+ELR+R
Sbjct: 138 DEQPEPNAFGAKKDTGNVL--MPDAQVRHLKDQLIRAKVYLSLPSAKANAHFVRELRLRI 195
Query: 904 KELERATGDTTKDKYLPKSSPNRLKAMEVALYKVSRAFHNCPAIATKLQAMTYKTEEXXX 1083
KE++RA D +KD LPK++ +LKAME L K + +C + KL+AM + +E
Sbjct: 196 KEVQRALADASKDSDLPKTAIEKLKAMEQTLAKGKQIQDDCSTVVKKLRAMLHSADEQLR 255
Query: 1084 XXXXXXXYLMQLAARTTPKGLHCLSMRLTTEYFTLDHEKRQLL-QQSYNDPDLYHYVVFS 1260
+L QL A+T PKGLHCL +RLTT+Y+ L+ ++Q Q+ D LYHY +FS
Sbjct: 256 VHKKQTMFLTQLTAKTIPKGLHCLPLRLTTDYYALNSSEQQFPNQEKLEDTQLYHYALFS 315
Query: 1261 DNVLAXXXXXXXXXXXXKEPDKIVFHVVTDSLNYPAISMWFLLNPSGRASIQILNIDEMN 1440
DNVLA K P K VFH+VTD LNY A+ MWFL NP G+A+IQ+ N++E
Sbjct: 316 DNVLATSVVVNSTITNAKHPLKHVFHIVTDRLNYAAMRMWFLDNPPGKATIQVQNVEEFT 375
Query: 1441 VLPLYHAELLMKQNSS---------------------DPRIISALNHARFYLPDIFPGLN 1557
L ++ +L + +S +P+ +S LNH RFYLP+IFP L+
Sbjct: 376 WLNSSYSPVLKQLSSRSMIDYYFRAHHTNSDTNLKFRNPKYLSILNHLRFYLPEIFPKLS 435
Query: 1558 KIVLFDHDVVVQRDLTRLWSLDMTGKVVGAVETCLEGDPSYRSMDSFINFSDAWVSQKFD 1737
K++ D D+VVQ+DL+ LWS+D+ G V GAVETC E S+ D ++NFS+ +S+ FD
Sbjct: 436 KVLFLDDDIVVQKDLSGLWSVDLKGNVNGAVETCGE---SFHRFDRYLNFSNPLISKNFD 492
Query: 1738 PKACTWAFGMNLFDLEEWRRQELTSVYLKYFDLGVKGHLWKAGGLPVGWLTFFGQTFPLE 1917
P+AC WA+GMN+FDL+EW+RQ +T VY ++ DL LWK G LP G +TF+ +T+PL+
Sbjct: 493 PRACGWAYGMNVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLD 552
Query: 1918 KRWNVGGLGHESGLRASDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNIHVPYHHPHLQRC 2097
++W++ GLG+ + DIE+AAVIHY+G +KPWL+IGI +Y+ +W+ HV Y H +L+ C
Sbjct: 553 RKWHILGLGYNPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLREC 612
Query: 2098 NIH 2106
NI+
Sbjct: 613 NIN 615
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 131
effective length of database: 253,773,515
effective search space used: 159369767420
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)