BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BE039024.f
         (716 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79821.1|AC026875_1  T6D22.1 [Arabidopsis thaliana]           60   4e-08
ref|NP_197750.1|  putative protein; protein id: At5g23600.1 ...    35   1.0  
ref|NP_182058.1|  unknown protein; protein id: At2g45330.1 [...    34   1.7  
dbj|BAA20137.1|  ZPT4-3 [Petunia x hybrida]                        34   1.7  
ref|XP_138602.2|  similar to hypothetical protein FLJ20330 [...    32   8.6  

>gb|AAF79821.1|AC026875_1 T6D22.1 [Arabidopsis thaliana]
          Length = 1417

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 31/43 (72%), Positives = 31/43 (72%)
 Frame = +2

Query: 326 TTQVTGKVKQ*SRGIKPSQICVTKPSSSSFSPPNQADEKGCGK 454
           TTQVTGK            ICVTKPSSSSFSPPNQADEKGCGK
Sbjct: 44  TTQVTGK------------ICVTKPSSSSFSPPNQADEKGCGK 74



>ref|NP_197750.1| putative protein; protein id: At5g23600.1 [Arabidopsis
           thaliana]|gi|8809699|dbj|BAA97240.1| contains similarity
           to phosphotransferase~gene_id:MQM1.13 [Arabidopsis
           thaliana]
          Length = 212

 Score = 35.0 bits (79), Expect = 1.0
 Identities = 19/34 (55%), Positives = 20/34 (57%)
 Frame = +3

Query: 486 LEDGIALYILDNIATLTHGIAGGANVDPSQRSSS 587
           LEDGIA YI DN   LT GI G   VD  Q+  S
Sbjct: 170 LEDGIAFYISDNKVILTQGIVGVLPVDYFQKIES 203



>ref|NP_182058.1| unknown protein; protein id: At2g45330.1 [Arabidopsis
           thaliana]|gi|25408946|pir||C84889 hypothetical protein
           At2g45330 [imported] - Arabidopsis
           thaliana|gi|2583121|gb|AAB82630.1| unknown protein
           [Arabidopsis thaliana]
          Length = 257

 Score = 34.3 bits (77), Expect = 1.7
 Identities = 19/34 (55%), Positives = 20/34 (57%)
 Frame = +3

Query: 486 LEDGIALYILDNIATLTHGIAGGANVDPSQRSSS 587
           LEDGIA YI DN   LT GI G   VD  Q+  S
Sbjct: 215 LEDGIAFYISDNKVILTEGIDGVLPVDYFQKIES 248



>dbj|BAA20137.1| ZPT4-3 [Petunia x hybrida]
          Length = 554

 Score = 34.3 bits (77), Expect = 1.7
 Identities = 21/62 (33%), Positives = 34/62 (53%), Gaps = 5/62 (8%)
 Frame = +2

Query: 368 IKPSQICVTKPS-----SSSFSPPNQADEKGCGKSIELIKPKLNTRRWDCVIHPRQHSDS 532
           +KPS  C+   S     SSS S  ++ +++   KS  L+K   ++R W+CV    + SD+
Sbjct: 179 VKPSSFCLVNSSTVNNSSSSVSEIDEQEQEEVAKS--LMKLSRDSRIWNCVTSVDESSDN 236

Query: 533 NS 538
           NS
Sbjct: 237 NS 238



>ref|XP_138602.2| similar to hypothetical protein FLJ20330 [Homo sapiens] [Mus
           musculus]
          Length = 666

 Score = 32.0 bits (71), Expect = 8.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 63  LCGCLDPGILSGLCLKTAGKN 1
           LC CL+P I+ GLC+   GKN
Sbjct: 345 LCSCLEPDIILGLCVAGIGKN 365



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 119
effective length of database: 269,842,067
effective search space used: 32111205973
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)