BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 154048.f
         (640 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_702074.1|  hypothetical protein [Plasmodium falciparu...    37   0.28 
gb|EAA22241.1|  hypothetical protein [Plasmodium yoelii yoelii]    35   1.0  
dbj|BAB09233.1|  gene_id:MDF20.10~pir||T08929~similar to unk...    32   5.2  
ref|NP_200377.1|  putative protein; protein id: At5g55660.1 ...    32   5.2  
ref|NP_701028.1|  hypothetical protein [Plasmodium falciparu...    32   8.9  

>ref|NP_702074.1| hypothetical protein [Plasmodium falciparum
           3D7]|gi|23497252|gb|AAN36798.1|AE014819_9 hypothetical
           protein [Plasmodium falciparum 3D7]
          Length = 585

 Score = 36.6 bits (83), Expect = 0.28
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
 Frame = -1

Query: 619 FHNLDYPIKSIINITYIKRYNQQSTEQY--KNLRTRSIL*FIISWHEEKKQYDCTVKL-- 452
           + N  +P K I N TYIK    ++  QY  KNL +  I  +  +  + K+     +K+  
Sbjct: 203 YDNQGFPYKHINNFTYIKHVYDKNNNQYNLKNLNSDYIFFYFNNSKDNKQDIQTLLKIKK 262

Query: 451 -CSPKSIKL---YTTD-QKFQTIYKQRESNPRNNNNKREGSKQ 338
             + K+IKL   +  D ++  T  ++ E N +N NN  + + Q
Sbjct: 263 KLAQKNIKLDIIFIRDIERKITQNEKSEKNEKNENNMLDTTNQ 305



>gb|EAA22241.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 1260

 Score = 34.7 bits (78), Expect = 1.0
 Identities = 28/122 (22%), Positives = 52/122 (41%), Gaps = 7/122 (5%)
 Frame = -2

Query: 636 ANNPRVSTTWITQSNR*LISH----TSKDIINNPLNSTKISEPDRSYSLSSAGMKKKNNT 469
           + N  + T+++ + NR  +S+    TS  I NN  ++   +  +  Y    +G+K K   
Sbjct: 441 SRNNNIFTSYVNK-NRNKLSNIKTMTSSFIENNFFHNNNSNSNNNMYKGFRSGVKNKTKN 499

Query: 468 IAXXXXXXXXXXXFTPPIRNS---KRSINKENRIQEITTTNEKDRNRFNTDQEEEKEADR 298
           +                 + S   KR+INKEN        + +D N  N+D  +++E D 
Sbjct: 500 MQKGDDGKSGNGINGEQDQGSNMNKRNINKENEDNRDNNEDNRDNNEDNSDNNDDEEYDN 559

Query: 297 RW 292
            +
Sbjct: 560 NF 561



>dbj|BAB09233.1| gene_id:MDF20.10~pir||T08929~similar to unknown protein
           [Arabidopsis thaliana]
          Length = 759

 Score = 32.3 bits (72), Expect = 5.2
 Identities = 15/37 (40%), Positives = 22/37 (58%)
 Frame = -2

Query: 411 NSKRSINKENRIQEITTTNEKDRNRFNTDQEEEKEAD 301
           +SKRS   + + +E T TN+K     + + EEEKE D
Sbjct: 481 SSKRSAKSQKKTEEATRTNKKSVAHSDDESEEEKEDD 517



>ref|NP_200377.1| putative protein; protein id: At5g55660.1 [Arabidopsis thaliana]
          Length = 778

 Score = 32.3 bits (72), Expect = 5.2
 Identities = 15/37 (40%), Positives = 22/37 (58%)
 Frame = -2

Query: 411 NSKRSINKENRIQEITTTNEKDRNRFNTDQEEEKEAD 301
           +SKRS   + + +E T TN+K     + + EEEKE D
Sbjct: 500 SSKRSAKSQKKTEEATRTNKKSVAHSDDESEEEKEDD 536



>ref|NP_701028.1| hypothetical protein [Plasmodium falciparum
            3D7]|gi|23496091|gb|AAN35752.1|AE014838_30 hypothetical
            protein [Plasmodium falciparum 3D7]
          Length = 2966

 Score = 31.6 bits (70), Expect = 8.9
 Identities = 24/89 (26%), Positives = 38/89 (41%), Gaps = 5/89 (5%)
 Frame = -2

Query: 582  ISHTSKDIINNPLNSTKISEPDRSYSLSSAGMKKKNNTIAXXXXXXXXXXXFTPPIRNSK 403
            ISH   D I NP++++ IS  D+S   ++    ++NN               T P+ N  
Sbjct: 1937 ISHVPNDTIKNPIDNSNISNLDKSNDTNNVIKHEENN---QTKENNLETIKHTEPLTNQN 1993

Query: 402  RS---INKENRIQEITTTN--EKDRNRFN 331
             +   IN  N  ++ T  N  E+  N  N
Sbjct: 1994 TNEVKINDHNEHEKNTEENKIEEQYNNIN 2022



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 118
effective length of database: 271,181,113
effective search space used: 25491024622
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)